Ligilactobacillus faecis: QFX10_01360
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Entry
QFX10_01360 CDS
T08999
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lfd
Ligilactobacillus faecis
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfd03016
]
QFX10_01360 (truA)
Enzymes [BR:
lfd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
QFX10_01360 (truA)
Transfer RNA biogenesis [BR:
lfd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QFX10_01360 (truA)
Prokaryotic type
QFX10_01360 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
WGN89747
LinkDB
All DBs
Position
complement(265545..266306)
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AA seq
253 aa
AA seq
DB search
MTQRYMITLAYDGTNFAGFQTQPKQRTVQSVLEKALNKMSKLDDYITVYGSGRTDAGVHA
LGQVIHFDFPHEISAQGMLRGLNSMLPLDCEVLECKIVSDDFHARFTTHGKRYMYRVSRS
WFTDPFKRFYTGHYKYPLDIERIKEALPDVVGTHDFSSFVASGSQTKDHVRTIYEATVRE
DQEQNEVIFEFYGNGFLYNQVRIMVATLLEIGNGKRPVHDFLRLYEVKDRNECRETAPAS
GLYLKKVYYPTEE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacgctatatgataactttagcttatgatggtacgaattttgcggggtttcaa
acacaaccaaagcaacggaccgtccaatctgtcttagaaaaagcgctcaataagatgagc
aaacttgatgactatatcactgtttatggttcaggtcgcactgatgcaggcgtgcacgct
ttagggcaagtgatccactttgattttccccatgagatctcagcacaagggatgttgcgg
gggttaaattcaatgttgccacttgattgtgaggttttagagtgtaagatcgtcagtgac
gattttcatgcgcggtttacgacacacggcaagcgctatatgtaccgagtgagtcgctcg
tggttcactgatccatttaaacgtttttacacggggcattataaatatccattagatatc
gagcggatcaaagaagccttgccagatgtcgttggcacacatgatttttcaagttttgtt
gcttctggcagtcagacaaaagaccacgtgcgcacgatctatgaagcaactgtgcgtgaa
gatcaggagcaaaacgaagtgatctttgaattttacggcaatggatttttatacaatcaa
gtccgcatcatggtcgccacgctccttgagatcggcaacggtaaacgcccagtacatgat
ttcttacgtttgtatgaagtcaaagatcgtaatgaatgccgggaaactgctccagcaagt
ggactttatttaaaaaaagtctactatccgacagaagaatag
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