Ligilactobacillus faecis: QFX10_04215
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Entry
QFX10_04215 CDS
T08999
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
lfd
Ligilactobacillus faecis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
EIIA-man
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_22
AAA_14
AAA_16
NACHT
RuvB_N
T2SSE
Rrf2
MarR_2
FaeA
HTH_IclR
TrmB
DUF7342
DEAD
HTH_20
AAA_7
ResIII
IstB_IS21
RNA_helicase
AAA_29
HTH_Crp_2
FtsK_SpoIIIE
AAA_18
AAA_24
GntR
SLFN-g3_helicase
LexA_DNA_bind
AAA_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WGN90277
LinkDB
All DBs
Position
858543..861293
Genome browser
AA seq
916 aa
AA seq
DB search
MTRKERILAYVTQNKTALTTAEIATALDILRNNVSKELNTLVREGHLQKISGRPVKYLLA
KQTASSALVADQIQVEHPTQDIFASMIGQKESLKNQIEQAKAAILYPPHGLNVLITGPTG
SGKTYFANAMHQFASEQKMLKTKEFITFNCADYAHNPQLLMSHLFGYVKGAFTGADEDRD
GLIQKADGGILFLDEVHRLPPEGQEMIFYFMDHGTYNRLGEIAKVHHADVRLICATTEDP
ESSLLKTFVRRIPIVIGMPQFEKRSVREQLALLKRLLTLEANRTKREIVVPEDVVKALLG
SVTFGNVGQLKSNIQLVCAQGFLNSVEQTEQINLEFEQLPPNIKEGLSRLASDRVRLGKL
AQLLEPVMVIVPDGEKPVIKESDRYELPYNLYEIIGNKAALLKEEGLDQSAINNFIMTDI
NVHLKSFYRDNKISRTEKNLNELVDQDTLRLTKEIIALLKRECNYHAGENFIYAMSLHLS
SFIKRVQSGRPMREVSDDLVTMVKDYPADLKLAKLIKEKLEAHYDFLVPESEVYYLAVLL
ISLNSVPKHGKVGVVVAAHGNHTASSMVQVVTELLAVDNLSAFDMSLEMDPKEALKAIAQ
KVVQVDRGNGVLLLVDMGSLGTFSEKISALTDIKIKTIDMVTTAMVLEAARKTALIDSDL
ASVYAELREFNGYSRKVEEVPVDELKPRAILALCSTGKGTAEKIKQMIDEILTEHLIDDV
CVLPLSVVGIKAQLKQIEEKYQLIATTGVADPKLGVPYISLEELFQGEVGKKRLVECLEQ
TETGHFETQTTKELAPDVTQEMAANYLEQYYTFINPKKIIHILWEYCAILEQERKEKLTD
TKRLAVVMHLGGTIERSLRNAPVSLTKKQALEIKEAPWAQAVKKADTYLETTLDLKLARA
EEYYIIKLLETEAVKN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaaaagaacggatcttagcctatgtcacgcaaaataagacagcgctaacaaca
gctgagatcgcaacggcattagatattttacgtaataatgtcagtaaagaattgaatacg
ttagtccgtgaagggcatttacaaaagatctcaggacgaccagtcaaatatcttttggca
aaacagaccgcgtctagcgcgcttgtggcagaccagatacaagttgagcatccgacccaa
gacatttttgcttcgatgatcggccaaaaggaaagtttgaaaaatcagatcgaacaagct
aaggctgcgatcttatatccaccgcacggcttaaatgttttgatcacagggcctactggt
tctgggaagacatattttgccaatgcgatgcatcagtttgcgagcgaacaaaagatgctc
aagacaaaagagttcattacgttcaactgcgctgattatgcgcataatcctcaattgttg
atgtctcatctttttggttatgtcaagggggcctttactggagcggatgaagatcgagat
ggtctgatccaaaaagccgatggtgggatcttatttttagatgaggtccaccgcttacca
ccagaaggacaagagatgatcttttactttatggaccatgggacatataaccgtctaggt
gagatcgctaaagtccaccatgctgatgtgcgcttgatctgtgccacaactgaagatcca
gagagttcacttttgaaaacgtttgtccgtcggatcccgatcgtgatcgggatgcctcag
tttgaaaaacggagcgtccgtgaacagttggccctcttgaaacgcctcttgactttagaa
gccaaccgcactaaaagagagatcgtcgtgccagaagatgttgtcaaagctttacttggg
agtgtgacttttggtaatgtcgggcagttgaaatcaaacatccagctcgtttgtgcgcaa
ggctttttaaatagtgtcgaacagacagaacagatcaatttagaatttgaacaacttccg
ccaaatatcaaagaaggtttgtcacgtttagccagtgaccgtgtacgtttaggcaaatta
gcccagcttttagaaccagtcatggtgatcgtgcctgacggtgaaaagcctgtgatcaaa
gagagcgaccgctatgaattaccgtataatttatatgagatcatcggtaataaggcagct
cttttaaaagaggaagggttggatcaaagtgcgatcaataattttatcatgactgatatc
aatgttcatttaaagtcattttatcgtgataataagatctcacggaccgaaaaaaattta
aatgaactggtcgatcaagatacacttcgtttgacaaaggagatcattgctttattaaaa
cgggaatgtaactatcatgcaggtgaaaatttcatttatgcgatgagtttacatctaagt
tcatttatcaaacgcgtccaatcgggacggccgatgcgcgaagtttctgatgatctagtt
acgatggtcaaagactatccggccgatttaaaattggctaagttgatcaaagaaaaatta
gaagctcattatgactttttagttcctgaatcagaagtgtattatttggcagtcttgttg
atctcgctcaattcggtacctaagcatggcaaagtcggtgttgttgtcgcagctcatgga
aatcatacggcttcttcgatggtccaagtcgtaacagagcttttagctgtagataatctt
agtgcttttgatatgtcacttgaaatggatccaaaagaagctttaaaagcgatcgcacaa
aaagtcgttcaagtcgatcggggcaatggtgtcttgcttctagtcgatatggggtcgctt
gggacatttagcgagaagatcagtgctttgactgatatcaagatcaaaacgatcgatatg
gtcacgacggcaatggttttagaagcagcacgaaaaacggctttgatcgatagtgatctg
gcgtctgtttatgccgaattgcgtgaattcaacggttattcgcgtaaagtcgaagaagta
ccagtcgatgaactcaaaccaagggcgatcttagctttatgttcaactggaaaaggtaca
gctgaaaagatcaagcagatgatcgatgagatcttgaccgagcatttgatcgatgatgtt
tgtgtcttgccgttatcggtcgtggggatcaaagcccaactcaaacagatcgaagaaaaa
taccagctcattgcaactactggagtggctgatcctaagttaggtgtaccatatatctcg
cttgaggagttattccaaggagaggttggaaaaaaacgcttggtcgaatgtttagagcaa
acagaaacagggcattttgagactcaaacgactaaagaactagctcctgatgtgacgcaa
gagatggcagctaattatttagagcaatactatacttttatcaatcccaaaaagatcatt
catattttgtgggaatactgtgcgatcttggaacaagagagaaaagaaaaactcactgat
acaaagcggttagctgtcgtaatgcatcttggtgggacgatcgaacggagcttaagaaat
gcaccagtctcactgactaaaaagcaagcgcttgagatcaaagaggcaccatgggctcaa
gcagtcaaaaaagcagatacttatttagagacaacgcttgatctgaagttagcacgagcc
gaagagtattacatcataaaattacttgagacagaagcagtcaaaaattga
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