Ligilactobacillus faecis: QFX10_05525
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Entry
QFX10_05525 CDS
T08999
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lfd
Ligilactobacillus faecis
Pathway
lfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QFX10_05525 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfd03019
]
QFX10_05525 (recQ)
03400 DNA repair and recombination proteins [BR:
lfd03400
]
QFX10_05525 (recQ)
Enzymes [BR:
lfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QFX10_05525 (recQ)
Messenger RNA biogenesis [BR:
lfd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QFX10_05525 (recQ)
DNA repair and recombination proteins [BR:
lfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QFX10_05525 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WGN90511
LinkDB
All DBs
Position
complement(1159934..1161709)
Genome browser
AA seq
591 aa
AA seq
DB search
MTPTTALKHYFGYDDFKDGQKQVIELVLAHQNTLALLPTGGGKSLCYQIPALLSPDLTLV
ISPLISLMKDQVDSLLQNGISAGLLNSSQSFAETKAVLQKARRHELKLLYIAPERLENQF
FLELLEDLPVSLVAVDEAHCISQWGHDFRPSYLKLPLLLAQLKQAPTVIALTATATPQVA
HDIKTLLQIPTTNEVKTSFARPNLTFKLIKGTNFEKYLLAYLKENPHESGIIYAATRKKV
EQLGNLLQKCGLNAGIYHAGLSETVRKQNQEDFLYDRTPIMVATNAFGMGIDKSNVRFVI
HAQVPGSLEAYYQEAGRAGRDGVASEAILFYKEADLRVQRFFIDNSEADEAHRERDYLKL
QSLSRYANTEECLQRFLVQYFGQDCPPCQKCTNCTDTRAKQDITKEAQMIMSCIIRMRAH
FGKKIVAQVLAGSKAKRILELGFDQLSTYGIMHKKATEIESLIDFLTASGYLETTNGQYP
TLRVAKRGGEVLRGAEQVFMRQEVVAKKVVMIDNELFEKLRHLRRELAEAQHVPPFVIFS
DQTLHEMCEKLPTDERAFLELKGVGHSKLEKYGKIFLDALTNYQTTKKEAH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcccacgactgctctcaaacattatttcggttatgatgactttaaagatggccaa
aaacaagttatcgaactcgtcttagcgcaccaaaacaccctggcattattgccgactggt
ggtggtaaatctctttgttaccagatccccgctctcttgagtcctgatctaacattagtg
atctcacctttgatctctttgatgaaagaccaagtcgatagccttttgcaaaatgggatc
agtgccgggttgctcaatagctcgcaaagttttgctgaaacaaaagcagttttgcaaaag
gcacgccgccacgaattaaaattgctctatatcgcaccagaaaggctcgaaaatcaattt
ttcttagaacttctagaagatctgccagtctccttagtcgcagtcgatgaagctcattgt
atctctcaatggggacatgattttcgtcccagttacttaaaattaccgcttttattagca
caactcaaacaggccccgactgtgatcgctctgactgcgactgcgactccgcaagtcgcg
cacgatatcaaaacgctcttacagatccccaccacaaatgaagttaaaacgagctttgca
cgccctaatctgacgtttaagctcattaaaggaacgaattttgaaaaatatttacttgct
tatctcaaagaaaatccgcatgaatcagggatcatttacgctgcgacacgcaaaaaagtc
gaacagctcgggaaccttttacaaaaatgtggcttaaatgctgggatctatcatgctggt
ctctctgaaactgtacgcaaacaaaatcaagaagactttctttacgatcgtaccccgatc
atggtcgcgactaatgcttttgggatggggatcgataaaagcaatgtccgttttgtgatc
cacgcccaagttccaggaagcttagaagcttattatcaagaagctggtcgggctgggcgt
gatggagtcgcaagtgaagccatcttattttataaagaagctgatcttcgtgttcaacgc
ttttttattgataattcagaagcagatgaggctcatcgtgaacgcgactatttgaaactg
caatctttgagccgttatgcgaatacagaagagtgtctccaacgctttttagtccaatat
tttggtcaagactgtcccccctgtcaaaaatgtacaaattgtacagatactcgggctaaa
caagatattacaaaagaagcacaaatgatcatgtcatgtatcattcggatgcgagcgcat
tttggcaaaaagatcgtcgcccaagttttagccggttcaaaagctaaacggatcttagaa
cttggttttgatcaactctcaacttatgggatcatgcacaaaaaagcgaccgagatcgaa
agtttgatcgactttttaactgcaagtggttacttggaaacaaccaacggtcaataccca
actctaagggtcgcaaaacgcggaggagaggttttacgtggcgcagaacaagtctttatg
cgccaagaagttgtcgccaaaaaagtcgtcatgatcgataatgaactctttgaaaaactg
cgccatttacgccgtgaactagctgaagctcaacacgtgcccccctttgtcatcttttct
gatcaaactttacatgagatgtgtgaaaagcttccgactgatgaacgtgcttttctcgaa
ctcaaaggcgtcggacacagtaaacttgaaaaatacggcaagatctttttagatgccttg
acaaactatcaaactactaaaaaagaagcccattag
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