Ligilactobacillus faecis: QFX10_06270
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Entry
QFX10_06270 CDS
T08999
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
lfd
Ligilactobacillus faecis
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
QFX10_06270
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GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
Zn_ribbon_10
DUF2564
Motif
Other DBs
NCBI-ProteinID:
WGN88686
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Position
complement(1362619..1363869)
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AA seq
416 aa
AA seq
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MKSMAKMQYHYGLKMRCYPSDQQKQLIKINSDASRFIYNEMVAIGKELMQLRRVKLPIDT
VQERIKQLTMRQNAKQMSNHYQFLEDKRIDSLAKANAIQNYRKAWNAFRKVHTAGVPKFH
RKSYRWRYQTNCQYPGQKTALLTNGTVCFLDNSHIKVPKIGLLRVAGSQARLLRRMCETR
IGTVTLTKDPADHFFLSMQLASDESFVKVSKANHGHIGIDLNTDNFLTDSDGNTVPNPRY
YRTIKGKLAKEQRILSRRQRRVKKEHRSLCDSKNYQKQRLLVAKLHAKVMNQRHNFLQQI
STALIKNHDLVVAEELRSKNMLKNHALALSISDVGWRTFLGMLAYKAKLYNHQFVTVSPK
NTTQTCNDCSFIMGTNNTEKLTLADREWTCPNCGIHHIRDWNAAKNILDKGIAKLA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaatggcaaaaatgcaatatcattatggcctgaaaatgcgttgctaccctagt
gaccaacaaaagcagttgattaaaattaacagtgacgctagtcgctttatctataacgaa
atggttgcgatcggtaaggaactgatgcaacttcgcagagttaagttaccgattgacaca
gtccaggagcgtattaagcaactaactatgcgtcaaaacgctaaacaaatgtctaatcac
tatcaatttttagaagataaacgaattgacagtttggcgaaagctaatgccattcagaac
taccgaaaagcttggaatgcctttcggaaggttcacactgctggtgttcctaaatttcat
cgaaagagttatcgctggcgttatcaaaccaattgtcaatacccagggcaaaagactgcg
ttgctaactaacggtacagtatgttttctagataatagccatatcaaagtacctaaaata
ggattgttacgtgttgccggttcccaagcacgtctcttgaggagaatgtgtgagactaga
attggtactgtgacattgactaaagatccagcggatcacttctttctatcaatgcaacta
gcttcagatgaatcttttgttaaagtgtccaaagctaatcacggacatattggaattgat
cttaatactgataatttcttaaccgatagtgacggtaacacagttcctaacccacgatat
tatcgtactattaaaggcaaattagctaaagaacagcgtattctatctagacgacaacgg
cgtgtcaaaaaagaacatcgttctttatgcgatagtaaaaattatcaaaagcaacgcttg
ttagttgctaaactccatgccaaagtaatgaaccaaagacataattttctccaacaaatc
tctactgcactaatcaagaaccacgatttagtagtagctgaggagttgcgtagtaagaat
atgctcaagaatcatgctttagcgcttagtatttctgacgttggctggcgaacatttctc
ggcatgttggcttataaagctaagctgtataatcatcagttcgtgactgtcagcccgaaa
aatactactcaaacttgcaatgattgtagttttatcatgggaactaataacaccgagaaa
ctaaccttggctgatcgtgaatggacgtgtcctaattgcggtattcatcatattcgtgac
tggaatgccgctaagaatattcttgataagggaattgctaaactagcctag
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