Ligilactobacillus faecis: QFX10_06710
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Entry
QFX10_06710 CDS
T08999
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lfd
Ligilactobacillus faecis
Pathway
lfd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QFX10_06710 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfd03021
]
QFX10_06710 (rpoE)
03400 DNA repair and recombination proteins [BR:
lfd03400
]
QFX10_06710 (rpoE)
Transcription machinery [BR:
lfd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QFX10_06710 (rpoE)
DNA repair and recombination proteins [BR:
lfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QFX10_06710 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
CDC27
Patatin
Motif
Other DBs
NCBI-ProteinID:
WGN88757
LinkDB
All DBs
Position
1455845..1456420
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AA seq
191 aa
AA seq
DB search
MELEKFKDADRDELSMVEVAHAILDQHGDVMAFADLTNAIQEYLGKSDQEIRDRLPQFYT
DLNVDGSFISLGDNLWGLRSWYPFESIDEALVHSEDEEEESRPRKKRKKVNAFLADAADD
DDVIDYNDDDPEDVDLDDEYDDEDDDEEDHELKAYSTDLSDIDDPEDAEDDLPDGIEGQL
TELSDDDLENE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttggagctagaaaaattcaaagacgctgatagagatgaattatcaatggtcgaagtcgca
catgcgatcttggatcaacatggtgatgtgatggcatttgccgatctaacaaatgcgatc
caagaataccttggcaaaagtgaccaagagatccgtgatcgtttgccacaattttatacg
gacctaaacgtcgatggtagttttatctctttaggcgataatctttggggcttgcgttca
tggtatccatttgaatcgatcgacgaagcgctcgttcactctgaagatgaagaagaagaa
agtcgtccacgtaaaaaacgcaagaaagtcaatgctttcttggcagatgcggctgacgat
gatgatgtcattgactataacgatgatgatccagaagacgtcgaccttgatgatgaatat
gatgatgaagacgatgatgaagaagatcacgaattaaaagcatatagcactgatttaagt
gatattgatgatccagaggatgcagaagacgatcttcctgacggtatcgaaggtcagttg
acagagttatctgacgacgacttagaaaatgaataa
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