Ligilactobacillus faecis: QFX10_06890
Help
Entry
QFX10_06890 CDS
T08999
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfd
Ligilactobacillus faecis
Pathway
lfd03420
Nucleotide excision repair
lfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QFX10_06890 (pcrA)
03430 Mismatch repair
QFX10_06890 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfd03400
]
QFX10_06890 (pcrA)
Enzymes [BR:
lfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QFX10_06890 (pcrA)
DNA repair and recombination proteins [BR:
lfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QFX10_06890 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QFX10_06890 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
FWWh
Terminase_6N
DUF6024
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WGN90570
LinkDB
All DBs
Position
1514688..1516889
Genome browser
AA seq
733 aa
AA seq
DB search
MNEKQAEAVACTEGPLLIMAGAGSGKTRVLTHRVAYLIEEKNVNPWNILAITFTNKAARE
MRERINNLIQEGAEDIWVSTFHALCVRILRRDAEKIGYDRNFTIASTSEQRTLMKHILVD
NLNVDVKKYDPRSVLSAISNAKNELKTPAELKKEATDPFALIVSDAYALYQEQLQNNQAF
DFDDLIMQTIRLFEESPETLAFYQHKFHYIHVDEYQDTNEAQYQLVSLLAKEYRNLCVVG
DADQSIYGWRGANMENILNFEEDYPDATVIKLEQNYRSTKTILQAANEVIENNVNRKVKT
LWTENNAGEKIHYYRASNANDEAYYVVKQIQAKMRKNAEKYGDFAVLYRTNAQSRVIEET
FVKANIPYKLVGAHRFYDRKEILDILAYLRLAANPNDSMSFMRVANEPKRGIGATSLTKL
QNFAEMNGLSLIEAAENVVMTEVSGKAAKQLENFASLIRRFNEFEKSKNITELTEIILDE
SGYKESLRIKNTLEDQSRLENLEEFLSVTKQFDENWQPEEEESDPFVDFLADLALVSDQD
SVEEEADEVTLMTLHAAKGLEFPTVFLMGLEEGIFPLSRATFDENELEEERRLAYVGITR
AEEELYLTNALSRMLYGRRQSNPASRFVDEISDELLIHEGETLESYVGQNKSTLNVPFEK
KHYRKPAGTVEKATGTGADKKQWNIGDKVEHKAWGIGTVVKVSGSGEESELDIAFAGQGI
KRLLAAFAPITKI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaacaagccgaagctgtagcctgtacagaaggtccgttactgatcatggca
ggagcaggtagtggtaagactcgtgtcttgacacatcgggtagcctacttgatcgaagaa
aaaaatgtaaatccttggaatattttagccattacttttaccaataaagctgcacgtgag
atgcgggaacggatcaataatttgatccaagaaggggctgaggacatttgggtctcgact
tttcatgccttatgcgtcaggatcttacgtcgagatgctgaaaagatcggctacgatcgg
aactttacgatcgctagtacaagtgaacagcgcacgctgatgaagcatattttagttgat
aatttaaatgtcgatgtaaaaaaatatgatccacgctctgttttgagtgcgatctcaaat
gctaaaaatgaattgaaaacaccagctgaactcaaaaaagaagcaacagatccatttgct
ctgatagtcagtgatgcatatgccttatatcaagaacaattacaaaataatcaagctttt
gattttgatgatctgatcatgcaaacgatccgcctatttgaagaatcaccggaaacactt
gctttttaccaacataagtttcactatatccacgtcgatgaatatcaagatacaaatgaa
gctcagtaccaacttgttagtttgctagccaaagaatatcgcaatctttgtgttgtcggg
gatgctgatcaaagtatctatggttggcggggcgctaacatggaaaatatcctgaacttt
gaagaagactatcccgatgctacggtgatcaaattagagcaaaattaccgctcaactaag
acgatcctccaagcagctaacgaagtgatcgaaaataacgtcaaccgaaaagttaagaca
ttgtggactgaaaataatgctggtgaaaagatccattattaccgggcaagcaatgcaaat
gatgaagcttattatgttgtcaaacagatccaagctaaaatgcgcaaaaatgcggaaaaa
tatggtgattttgctgtgctttatcggacgaatgcccagtcacgtgtgatcgaagaaact
tttgtcaaagctaatatcccttataaattagtcggagcgcatcgtttctatgatcgcaaa
gagatcttagatattttggcctacttgcgtctagcagccaatccgaatgattcaatgagt
tttatgcgtgttgctaatgaaccaaagcgtgggatcggagcgacaagtttgacgaaattg
caaaattttgctgagatgaacggcctgtcgctgatcgaagcagctgaaaatgttgtaatg
actgaggtgagtggtaaagctgctaagcaacttgaaaattttgcaagcttgatccggcgc
ttcaatgaatttgaaaagagtaaaaatatcacagaattgactgagatcattttagatgaa
tcaggttacaaagaaagcttacgcataaaaaatactttagaagaccaaagtcgtttagaa
aacttagaggagtttctttcagttacaaaacaatttgatgaaaattggcagccagaggaa
gaagagagcgatccattcgttgacttcttagctgacttagctttagtttcagaccaagat
agtgttgaggaagaagcagacgaggtaactttgatgactttgcatgcggctaaagggctt
gaatttccgacggttttcttgatgggattagaagaagggatcttcccgctcagtcgcgct
acttttgatgaaaatgaattggaagaagaaagacgtttagcctatgtggggatcactcgg
gctgaagaagagctttatttgacgaatgctttatcccgaatgctttatgggcgtcgacaa
agcaatccagcttcacgttttgtcgatgagatctcagacgaattattgatccatgaagga
gaaacgcttgaaagttatgttggtcaaaataagagtacgctaaacgtcccatttgaaaag
aagcattatcgtaaaccagctggaacagttgaaaaagcaactggaacaggggcagataaa
aaacaatggaatatcggtgataaagtcgagcataaggcttgggggatcggaacggtcgtc
aaagtcagtggcagtggcgaagaaagtgaactcgatatcgcttttgctggtcaagggatc
aaacgtcttttagcagcttttgcaccgatcacaaagatctaa
DBGET
integrated database retrieval system
