Ligilactobacillus faecis: QFX10_07335
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Entry
QFX10_07335 CDS
T08999
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lfd
Ligilactobacillus faecis
Pathway
lfd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QFX10_07335 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfd03400
]
QFX10_07335 (uvrB)
DNA repair and recombination proteins [BR:
lfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QFX10_07335 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QFX10_07335 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_19
AAA_7
AAA_5
DUF8810
AAA_30
FAD_binding_1
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
WGN88868
LinkDB
All DBs
Position
1608795..1610798
Genome browser
AA seq
667 aa
AA seq
DB search
MIERQADKEFKLVSKYEPTGDQPTAIASLVDGIKAGKKEQILLGATGTGKTFTISNVIAK
VNKPTLVLAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVIVVASVSSIFGLGDPNEYRDQALSLRVGQELERDKLLQQ
LIEVQFERNDIDFQRGRFRVRGDVVEIFPASRDEQALRIEFFGDEIDRIREVDPLTGEIL
GDRSHVVIFPATHFLTSGERLESSIQSIEAELKERLEVLREEGKLLEAQRLEQRTTYDIE
MLREMGYCSGIENYSRHMDGRKPGQAPYTLLDFFPDDFLIVVDESHVTMPQVRGMYNGDR
SRKQMLVDHGFRLPSALDNRPLKLAEFEDHVDQIVYMSATPGEYEKEHTDEVVQQIIRPT
GLLDPDVEVRPIMGQMDDLVCEIEKRVKRDERVFVTTLTKKMAEDLTDYFKEMSIKVKYL
HSDIKTLERTEIVRDLRLGKFDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNERSLI
QTIGRAARNENGHVIMYADKVTDSMQAAIDETKRRRTLQMQYNEEHHIKPKTVKKAIRDV
ITITAKPEEHLKDLDREIAFDELDKKEQLEMIARLEEQMRTAAKNLEFEDAAALRDTVLE
LKTQIGQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacgtcaagctgataaggagttcaaattagtttcaaaatatgaaccaactgga
gatcaacctactgcgatcgcaagtttagttgatgggataaaagcaggaaaaaaagaacag
atcttacttggagcgactgggacggggaaaacctttaccatctcaaatgtgatcgcaaaa
gttaataaaccgacgctcgttttagctcataataagacgcttgccggtcagctctatggg
gaattcaaagaattcttcccagaaaatgcagttgagtattttgttagttactatgattac
taccaaccagaagcttacgtcccctcaagtgatacgtacattgaaaaagattcaagtata
aatgacgagatcgataaattgcgccactcagctactagttcgttgctcgaacgaaatgat
gtgatcgtagttgcttcggtctcgtcgatctttggtttaggtgatccaaatgaatatcgc
gatcaagctctttctttgcgtgttgggcaagaacttgaacgcgacaaattattacaacaa
ttgatcgaagttcaattcgaacgaaatgatatcgattttcaacgggggcgttttcgtgtc
cgaggcgatgtagtcgagatctttccagcttcacgagatgaacaagcattgcgtattgaa
ttttttggcgacgagatcgatcggatccgtgaagttgatcctttgacaggcgagatctta
ggagatcgcagtcatgttgtgatcttcccagcgacccactttttaacgagtggtgaaagg
ttagaaagttcgatccaaagtattgaagctgaactcaaagaacgcttagaggttttacgt
gaagaaggtaaacttttagaagctcagcgacttgaacaacgtacaacttatgatatcgag
atgttgcgtgagatgggatattgttcagggatcgaaaattactctcgccatatggatgga
cgcaagccagggcaagcaccgtatacgctacttgattttttcccagatgattttttgatc
gttgtcgacgaatcacacgtgacgatgcctcaagtacgcgggatgtataatggtgaccgc
tcgcgcaagcaaatgttggtcgatcatggtttccgtttgccaagtgccttagataatcgg
ccgttaaaattagctgaatttgaagaccatgtcgatcagatcgtctatatgtcagctact
cctggtgaatatgaaaaagagcatactgatgaagttgtgcaacagatcattcgtccaaca
gggcttttagatccagacgttgaagttcgcccgatcatggggcaaatggacgatcttgtt
tgcgagatcgaaaaacgagtcaaacgagatgagcgtgtttttgtaacaactttgaccaaa
aagatggctgaagacctaactgactatttcaaggaaatgagtatcaaagtcaaatatcta
cattcggatatcaagacacttgaacgaacagagatcgttcgtgacttacgtttaggtaaa
tttgacgtcttagttgggatcaacttattgcgtgaagggatcgatgtgccagaagtttcc
cttgttgcgatcttagatgctgataaagaaggatttttacgcaatgaacgctccttgatc
caaacgatcgggcgggcagcacgtaacgaaaatggacatgtgatcatgtatgctgataag
gtgacagattcgatgcaagctgcgatagatgaaacaaagcggcggcgaacgctccaaatg
caatacaatgaggagcaccatatcaaaccaaaaacagtcaaaaaagcgatccgtgatgtg
atcacgatcacagctaaaccagaagagcacctaaaagatcttgatcgagagatcgctttt
gatgaattagataagaaagaacagttagagatgatcgcacgtttagaagaacaaatgcgg
accgcggctaaaaacttagaatttgaagatgcagctgcattgcgggatactgttttagag
ttaaaaacacagatcggacagtaa
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