Ligilactobacillus faecis: QFX10_07500
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Entry
QFX10_07500 CDS
T08999
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
lfd
Ligilactobacillus faecis
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
QFX10_07500
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
Zn_ribbon_10
GSH-S_N
DUF2564
Motif
Other DBs
NCBI-ProteinID:
WGN88896
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Position
1648488..1649738
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AA seq
416 aa
AA seq
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MKSMAKMQYHYGLKMRCYPSDQQKQLIKINSDASRFIYNEMVAIGKELMQLRRVKLSIDT
VQERIKQLTMRQNAKQMSNHYQFLEDKRIDSLAKANAIQNYRKAWNAFRKIHTAGVPKFH
RKSYRWRYQTNCQYPGQKTALLTNGTVCFLDNSHIKVPKIGLLRVAGSQARLLRRMCETR
IGTVTLTKDPADHFFLSMQLASDEPFVKVSKANHGHIGIDLNTDNFLTDNEGNTVPNPRY
YRTIKGKLAKEQRILSRRQRRVKKEHRSLRDSKNYQKQRLLVAKLHAKVMNQRHNFLQQI
STALIKNHDLVVAEELRSKNMLKNHALALSISDVGWRSFLGMLAYKAKLYNHQFVTVSPK
NTTQTCNDCSFIMGTNNTEKLTLADREWTCPNCGIHHIRDWNAAKNILDKGIAKLA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaatggcaaaaatgcaatatcattatggcctgaaaatgcgttgctaccctagt
gaccaacaaaagcagttgattaaaattaacagtgacgctagtcgctttatctataacgaa
atggttgcgatcggtaaggaactgatgcaacttcgcagagttaagttatcgattgacaca
gtccaggagcgtattaagcaactaactatgcgtcaaaacgctaaacaaatgtctaatcac
tatcaatttttagaagataaacgaattgacagtttggcgaaagctaatgccattcagaac
taccgaaaagcttggaatgcttttcggaagattcacactgctggtgttcctaaatttcat
cgaaagagttatcgctggcgttatcaaaccaattgtcaatacccagggcaaaagactgcg
ttgctaactaacggtacagtatgttttctagataatagccatatcaaagtacctaaaata
ggattgttacgtgttgccggttcccaagcacgtctcttgaggagaatgtgtgagactaga
attggtactgtgacattgactaaagatccagcggatcacttctttctatcaatgcaacta
gcttcagatgaaccttttgttaaagtgtccaaggctaatcacggacatattggaattgat
cttaatactgataatttcttaaccgataatgaaggtaacacagttcctaatccacgatat
tatcgcactattaaaggtaaattagctaaagaacagcgtattctatctagacgacaacgg
cgtgtcaaaaaagaacatcgttctttacgcgatagtaaaaattatcaaaagcaacgcttg
ttagttgctaaactccatgccaaagtaatgaaccaaagacataattttctccaacaaatc
tctactgcactaatcaagaaccacgatttagtagtagctgaggagttgcgtagtaagaat
atgctcaagaatcatgctttagcgcttagtatttctgacgttggctggcgttcctttctc
ggcatgttggcttataaagctaagctgtataatcatcagttcgtgactgtcagcccgaaa
aatactactcaaacttgcaatgattgtagttttatcatgggaactaataacaccgagaaa
ctaaccttggctgatcgtgaatggacgtgtcctaattgcggtattcatcatattcgtgac
tggaatgcagctaagaatattcttgataagggaatagctaaactagcctag
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