Ligilactobacillus faecis: QFX10_09275
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Entry
QFX10_09275 CDS
T08999
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lfd
Ligilactobacillus faecis
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfd03019
]
QFX10_09275 (rnc)
03009 Ribosome biogenesis [BR:
lfd03009
]
QFX10_09275 (rnc)
03036 Chromosome and associated proteins [BR:
lfd03036
]
QFX10_09275 (rnc)
Enzymes [BR:
lfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
QFX10_09275 (rnc)
Messenger RNA biogenesis [BR:
lfd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QFX10_09275 (rnc)
Ribosome biogenesis [BR:
lfd03009
]
Eukaryotic type
90S particles
RNase
QFX10_09275 (rnc)
Prokaryotic type
rRNA processing factors
QFX10_09275 (rnc)
Chromosome and associated proteins [BR:
lfd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
QFX10_09275 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Dicer_dimer
Motif
Other DBs
NCBI-ProteinID:
WGN89223
LinkDB
All DBs
Position
complement(2030092..2030784)
Genome browser
AA seq
230 aa
AA seq
DB search
MIIGLTQMLKEDFGIDFKDTTLLDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVS
EYLFKRYPTLPEGKLSRLRAAMVCEDSFSRFAKECHFDEYIRLGKGEEKSNARNRSSLLC
DIFEAFIGALYLDQGKEVVVSFISRVVFPKLDMGWFDHYLDHKTELQELLQQNGDCKINY
VKVAEVGPDNEKEYTMAVYADGQKVGEGTGMSKKAAEQQAALQALKALRK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttgataattggattgacacagatgttaaaagaggattttggcatcgattttaaagatacc
acattattggatgaagcatttacccatgcttcttatgtaaatgagcatcctaaagaacat
ttaaaatactatgaacggatcgaatttttaggtgacgcagtgatgcaattatgtgtttca
gaatatctatttaaacgttatccgactttgcctgaaggaaagttatcacgtttaagagca
gccatggtctgtgaagatagctttagtcgctttgctaaggagtgccactttgatgaatat
atccgtttaggtaaaggggaagaaaaatcaaatgctcgaaatcgctcatccttactttgc
gatatttttgaggcttttatcggggctttatatttagatcaaggtaaagaagtcgttgtt
tcctttatcagtcgagtcgttttcccaaaacttgatatgggctggttcgatcattattta
gatcataaaacagaattgcaagagctactgcaacaaaatggtgattgtaagatcaactac
gttaaagtcgcagaagttggtccagataacgaaaaagagtataccatggcagtttatgct
gatgggcaaaaggtcggagaaggcacagggatgtctaaaaaggcggctgaacaacaagca
gctttacaggcattgaaagccctacgaaaataa
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