Ligilactobacillus faecis: QFX10_09805
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Entry
QFX10_09805 CDS
T08999
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lfd
Ligilactobacillus faecis
Pathway
lfd03030
DNA replication
lfd03410
Base excision repair
lfd03420
Nucleotide excision repair
lfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QFX10_09805 (polA)
03410 Base excision repair
QFX10_09805 (polA)
03420 Nucleotide excision repair
QFX10_09805 (polA)
03440 Homologous recombination
QFX10_09805 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfd03032
]
QFX10_09805 (polA)
03400 DNA repair and recombination proteins [BR:
lfd03400
]
QFX10_09805 (polA)
Enzymes [BR:
lfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QFX10_09805 (polA)
DNA replication proteins [BR:
lfd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QFX10_09805 (polA)
DNA repair and recombination proteins [BR:
lfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QFX10_09805 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QFX10_09805 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WGN89318
LinkDB
All DBs
Position
complement(2147056..2149719)
Genome browser
AA seq
887 aa
AA seq
DB search
MAEKKRLLLIDGNSVAFRAFFAMHNQLERFVNHAGLHTNAIYGFKLMLDKILAEVDPQNV
LVAFDAGKVTFRTKAYADYKGGRSKTPGELSEQFPYLKELLTAYGIKNYELPNYEADDII
GTMAKRAEDEGYQVTIVTGDRDLTQLTTDNTTVAVTIKGVTEIEKYTPKHVLEKYGLEPA
QIIDMKGLTGDSSDNYPGVTKVGEKTAIKLLKQYGSIEGIYENIAEMKKSKLKENLLADQ
ELAFKCKELATIKQDAPVEMTLAQTTWNGKDHTKLVDFFEEMDFKSFLTQLDAKIPEEDE
AISHLAVTPLTTETFAKLDLTPDSDISFYLELADDNYHTADFWGFVFKIDEKYYASRDVE
LLKEPKLKTLLEDERFKIDVFDGKQTYAALDRLGITLTGINFDLLLVSYLLNTSDNSNDL
GSLAKRHNYLDVKTDEEVYGKGAKKKVPADDQLYFEHLAHKAKAISDLEDQLMEELAQNK
QDELYFEIERPLSLVLAQMELAGIKVDRERLDRMQSEFKERLSELEQVIYQEAGEEFNIN
SPKQLGVILFEKLKLPVIKKTKTGYSTAVGVLEKLRGMSPIIDNILLYRQLAKLQSTYVE
GLLKVIAPDGKVHTRYTQTLTATGRLSSVDPNLQNIPVRLEEGRKIRQAFVPSHPDWEIF
ASDYSQIELRVLAHISGDKGMQQAFREDRDIHANTAMQIFGLDDPSQVTPNMRRQAKAVN
FGIVYGISDFGLAQSINSTRKQAKEFMEAYFASFPGVHRYMQEIVEQAKEQGYVETLFHR
RRYLDDINSRNYNLRSFAERTAMNTPIQGSAADIIKVAMINMQKMLQKEGLQAKMLLQVH
DELIFEAPKDEIEKLAQLVPQVMDSAVSLAVPLKVESASGKTWFDTK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaagaaacgattacttttgatcgatgggaatagtgtggcttttcgtgctttt
tttgcgatgcataatcaactagagcggtttgtcaatcatgcgggattgcatacaaatgcg
atctatggttttaaattgatgttagataagatcttagctgaagttgatccgcaaaatgtt
ttagtggcttttgatgctggtaaggtaacttttagaactaaagcttatgctgattataaa
ggaggacgttctaagactccaggggagctttccgagcagtttccatatttaaaagagtta
ttgactgcttatgggatcaaaaattatgaactacctaactacgaagctgatgatatcatc
ggaacgatggctaaaagagcagaagatgaaggttatcaagttacgatcgtgacaggagat
cgagatctaacgcaattgacgacagataacacgactgtagcggtaacgatcaaaggcgtt
acagagatcgagaaatatactccaaaacatgttttagaaaaatatggcttagagccagct
cagatcattgatatgaaaggtctgactggggatagttcagataattatcctggggtaaca
aaagttggcgaaaaaaccgcgatcaaacttttgaaacagtatggttcgatcgaagggatc
tatgaaaatatcgccgagatgaaaaaatcaaaactcaaagaaaatcttttggccgaccaa
gagcttgctttcaaatgtaaagaacttgccacgatcaaacaagatgcgccagtcgaaatg
accttagctcaaactacatggaacggtaaagatcatactaaactcgttgacttttttgag
gagatggattttaagagtttcttaacgcaattagacgctaaaatacctgaagaagacgaa
gctatcagtcacttagctgtgacccctttgacaactgaaacattcgctaaactcgatctt
acacctgactcagatatcagtttttatttagagttagctgatgataattatcatacagcc
gatttttggggctttgtttttaagatcgatgaaaaatactatgcaagtcgggatgttgag
ctgttaaaagagccaaagttaaagacgcttcttgaagatgaacgttttaagatcgatgtt
tttgatggaaaacaaacttatgctgcgcttgatcggttagggatcacactaactgggatc
aattttgatcttttattagtatcttatctcttgaatacaagcgataatagcaatgatcta
gggagtttggctaaacggcataactatttagacgtcaaaacagatgaagaagtttacggt
aaaggcgcaaagaaaaaagttcccgctgatgatcagctctattttgaacatttagcgcat
aaagccaaggcgatctcagatcttgaagatcaattgatggaagaactagcgcaaaacaaa
caagatgagctttattttgagatcgaacgtcccctttctttagttttagcgcagatggag
ctggctgggatcaaagtagatcgtgagcggcttgatcgcatgcaaagcgagtttaaagaa
cgtttaagcgagttagagcaagtgatctatcaggaagccggagaagaattcaatatcaat
tcacccaaacaactgggagtgatcttatttgaaaagctcaaattaccagttatcaaaaag
acaaaaactggttattcaacggcagttggtgttttagaaaaattacggggaatgtcaccg
atcatcgataatattttattatatcgtcagttagctaagttacagtctacttatgtcgaa
gggcttttaaaagtgatcgcaccagatggaaaagtacacacgcgttatacacaaactttg
actgcaaccggacgtctatcttcagtcgatcctaacttgcaaaatatcccagttcgctta
gaagaaggccgtaagatcagacaagcgtttgttccaagtcatcccgactgggagatcttt
gcgtctgattattcgcagatcgaattacgcgttttagcacatatctcaggcgataaaggg
atgcaacaagcctttcgggaggatcgcgatatccatgctaatacggccatgcagatcttt
ggcttagatgatccaagtcaagtaacgcctaatatgcgtcgtcaagccaaagctgttaac
tttgggatcgtttatgggatcagtgattttgggttggcccaaagcatcaatagtacacgt
aaacaagcgaaagagtttatggaagcttattttgcctcgttcccaggtgtccatcggtat
atgcaagagatcgttgagcaagctaaagaacaaggctatgttgaaacacttttccaccgc
cgccgttatttagatgatatcaatagcagaaactataatctgcgttcttttgccgaaaga
actgcaatgaatacgccgatccaaggaagtgctgccgatatcatcaaagttgcgatgatc
aatatgcaaaagatgctccaaaaagaaggcttacaagctaagatgctcttgcaagtccac
gatgagttgatctttgaagcgccaaaagatgagatcgaaaaactagcccaacttgtgcca
caagtgatggattctgcagtttcattagccgtgccacttaaagtcgaaagtgctagtggc
aaaacgtggttcgatacaaaatag
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