Ligilactobacillus faecis: QFX10_09905
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Entry
QFX10_09905 CDS
T08999
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lfd
Ligilactobacillus faecis
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfd03019
]
QFX10_09905
Messenger RNA biogenesis [BR:
lfd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QFX10_09905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
WGN90601
LinkDB
All DBs
Position
complement(2167447..2168397)
Genome browser
AA seq
316 aa
AA seq
DB search
MLNKRIFDYKNDENIELFVLIKSAETRIAKNGKQFIAFNFSDQSGVISAKFWDASKEAIA
TFTPGKVVYLKGKRELYQNNPQIKIFKLRLAKESEPQDPALFVQKAPEKRVEIEAELNRY
LFEITNPTWNRIVRALLKEYQKEFFTFPAAKSNHHAYAGGLAFHTLSILRLAKALGTQYP
QLDTSLLYAGAILHDIGKVLELSGPVATSYTLAGNLLGHIVLIDEEIVKTCERLGLATES
EDALLLRHMIISHHGLLEYGSPVRPHLVEAEVLHQLDNLDASLQMLDKSLEHTAPGEFTE
RIFGLDGRNFYRPSEK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atattgaataaaagaatctttgattataaaaatgatgaaaatatagaactttttgttttg
atcaaatcggctgagacgcggatcgctaaaaatggaaaacaatttattgctttcaatttt
tctgatcagtccggtgtgatcagtgctaaattttgggatgcttctaaagaagcgatcgct
acttttacgcctggaaaggtcgtatatctcaaaggcaagcgcgaactctatcaaaataat
cctcagatcaagatctttaaattgcgcttagctaaagaaagtgagcctcaagatcccgca
ctttttgtacaaaaagcacctgaaaaaagagttgagatcgaagcagaattgaaccgttat
ctctttgagatcactaatcctacgtggaatcggatcgtgcgtgctttattaaaggaatat
caaaaggaatttttcaccttccctgcagctaaatcaaatcatcatgcatatgctgggggt
ctagcttttcatacgctttcgatcttacgtttagccaaagcgttaggtacacaatatccg
cagttagatacttcgttattgtatgcaggagcgatcttgcacgatattggtaaagtttta
gaactttcaggtccagttgctacgtcttatactttagcgggaaatcttttagggcatatc
gttttgatcgatgaagagatcgttaagacctgtgaacgtctaggacttgcaactgaaagt
gaggatgcgcttttattacgacatatgatcatttcacatcatggtttgttagaatatggt
tcacctgtgcgtccgcacttggtcgaagctgaagtgttgcatcagttagataacttagac
gcttctttacaaatgttagacaaaagtttagaacatacagcaccaggagaatttactgag
cggatctttgggctggatgggcgcaatttttatcgtcctagtgaaaaataa
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