Limosilactobacillus fermentum IFO 3956: LAF_0006
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Entry
LAF_0006 CDS
T00699
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfe03032
]
LAF_0006
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0006
Enzymes [BR:
lfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LAF_0006
DNA replication proteins [BR:
lfe03032
]
Prokaryotic type
DNA Topoisomerases
LAF_0006
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAF_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
7tm_6
Motif
Other DBs
NCBI-ProteinID:
BAG26342
LinkDB
All DBs
Position
6167..8677
Genome browser
AA seq
836 aa
AA seq
DB search
MPEQEMPGRITDVNLTSQMRNSFLDYAMSVIVSRALPDVRDGLKPVQRRILYGMNELGVT
PDKPYKKSARIVGDVMGKFHPHGDSSIYEGLVRMAQDFSYRYMLVDGHGNFGSVDGDGAA
AMRYTEAKMSKIAVEMLRDINKDTVDFQDNYDGTEKEPAVLPARFPNLLVNGASGIAVGM
ATNIPTHNLGEVISAIHMLMNNPDVTVAELMKALPGPDFPTGGVVMGKAGIRQAYESGQG
SIIVRAKVEIEEQKNGKQRIVVHEIPYMVNKAKLIERIANLAREKEIDGITDVNDETDRE
GMRIVIDVRRDASAEVILNNLYKMTLMQTTYNFNMLAIVKGAPKILSLKEILQYYLEHQE
EVVRRRTEFDLKKAQNRAHIVAGLRIALDHIDAIINIIRSSETSELAKQRLMDDYSLSDR
QAQAILDLRLVRLTGLEREKIEDEYQKLVAAIADYKDILAHQERINQIIYDELMEIQNKF
GDERRTELQVGDISNIEDEDLIEEEDIIVTLTHNGYVKRLPVDEFKAQNRGGRGVKGMGV
HSDDFIEHLVASSTHDLLLFFTNTGKVFAMKGYEIPEYGRAAQGIPIINLLDVDGKEKVT
AVINVAQREDDLQKDLFFVTRQGTVKRTPVTEFKNIRSNGIKAINLHEGDELINVAIVDD
DQNMILGTHLGHAATFKVSAVRSMGRSAAGVRGARLRDGDYLIGAAPLNEDDQVLVISEK
GYGKKTPASEYPIKGRGGLGIKTVNVTEKNGPLAGLTTVQGDEDLMVVTDKGVIIRFGVE
SVSQTRRSAIGVHLIKMDADSVVATMTKVEKETAETDPTEASAEEAETPVEGPNEI
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaacaagagatgcctggacggataaccgacgttaatctgaccagccaaatgcgg
aattcattcttggattacgccatgagtgtcatcgtctcccgggccctacctgacgttcgt
gatggtttaaagccggttcagcgccggattttatacggaatgaacgaactgggggtcact
ccggataagccctacaagaagtcggcccggatcgtgggggacgtcatggggaaatttcac
ccccacggggactcttcgatttacgaggggctcgttcggatggcccaagacttctcctac
cgttacatgctggtcgacgggcacggtaacttcggctccgtcgatggggacggggcggcc
gccatgcggtacaccgaagctaagatgagcaagatcgccgtcgaaatgctgcgcgacatc
aacaaggacaccgttgatttccaagacaactacgacggtaccgaaaaagaaccggctgtc
ctgccggcccgcttcccgaacctcttggtgaacggggcctcggggattgccgtcgggatg
gctaccaacatcccaacccataacctgggcgaagtaatctcggcaattcacatgctgatg
aataacccggacgtgacggttgccgagctgatgaaggccttaccaggaccggacttccca
accgggggcgtggtcatgggtaaagcggggattcgccaggcctacgagagcggtcagggt
tcgattatcgtccgggccaaggtggaaattgaggagcaaaagaacggcaagcaacggatc
gtcgttcacgaaattccgtacatggttaacaaggccaagctgatcgagcggatcgccaac
ctcgcccgggaaaaggaaatcgatggaattaccgatgtcaacgacgaaaccgaccgggaa
gggatgcggatcgtaattgacgttcgtcgcgacgccagtgccgaggtgatcttaaacaac
ctctacaagatgaccctgatgcaaacgacttacaacttcaacatgttggcgatcgttaag
ggcgccccgaagatcctgtcattaaaagagatccttcagtactacttggaacaccaagaa
gaagtggttcgccggcggaccgaattcgacttgaaaaaggcccaaaaccgggcccacatc
gtcgccgggttacggattgccttggatcacatcgacgcgatcatcaacatcatccggagc
tcggaaacttccgaactggctaagcaacggctgatggacgactacagcctgtccgatcgc
caagcccaagccattttggacctgcggctggtacgcctgaccgggttggaacgcgaaaaa
attgaagacgagtaccaaaaactagtggccgccattgcagattacaaggacatcttggcc
caccaggaacggattaaccagatcatttacgatgaactgatggaaatccaaaacaagttt
ggtgacgagcgccggaccgaattacaagtcggcgacatttccaacatcgaagacgaagac
ctgatcgaagaagaagacatcatcgtcacactcacccacaatggttacgtcaagcgcttg
ccggttgacgaatttaaggcccagaaccgtgggggccgcggggtgaaggggatgggcgtc
cacagtgacgacttcatcgagcacctggtcgctagttccactcacgacctcttgctcttc
ttcaccaacaccgggaaggtctttgccatgaagggctacgaaattccagagtacggtcgg
gccgcccaggggattccgatcattaacctcctggacgtcgacggcaaggaaaaggtgacc
gccgtgatcaacgttgcccaaagagaagacgacttacaaaaggacctcttctttgtgacc
cggcagggaacggttaagcgcacgccggtgacggaatttaagaacattcgctctaacggg
atcaaggccattaacctgcacgagggtgatgaactgatcaacgtggcgattgtcgatgac
gatcaaaacatgattctagggacccacctgggccacgccgccacctttaaggtgagtgcc
gttcggtcaatgggacgatccgccgccggggtccggggggcccgcctacgggacggtgac
tacctgattggtgccgcaccgttaaacgaggatgaccaggttctggttatctcggaaaag
ggctacggcaagaagacgccggccagcgagtacccaattaagggccggggtggcctgggg
atcaagaccgtcaacgtgaccgaaaagaacgggccactcgccgggttaaccaccgttcag
ggggacgaagacctgatggtggtgaccgataagggggtcatcatccgctttggcgttgaa
tccgtctcccaaaccaggcgctcagcaattggggtccacctgatcaagatggacgccgac
tcagtggtggccacgatgaccaaggtcgaaaaagagaccgcagaaacggatccaaccgaa
gcaagcgctgaagaagccgaaacgccggttgaaggtcccaacgaaatttaa
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