Limosilactobacillus fermentum IFO 3956: LAF_0201
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Entry
LAF_0201 CDS
T00699
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAF_0201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfe03021
]
LAF_0201
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0201
Transcription machinery [BR:
lfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAF_0201
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAF_0201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Glypican
Motif
Other DBs
NCBI-ProteinID:
BAG26537
UniProt:
B2GA55
LinkDB
All DBs
Position
245892..246479
Genome browser
AA seq
195 aa
AA seq
DB search
MDLKVFDGQEKSELSMIEVAHAILAYHNEAMAFADLTNEIQQYLGKSDEEIRERLSQFYT
DLNVDGSFISLGDNTWGLRAWYPYESIDEATVGETEDEEDRPKKRRRKVNAFLAGTDDDD
DVIDYDNDDPEDEDLDDDQGPDDDDDYEEDDYDEDNPVEDDDEETNIEDQLSELHGDEFG
DDEEEDEEDKEDDEE
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttggatttaaaggttttcgatggccaggaaaaatcagaactttcaatgatcgaagtggct
cacgcaatcttagcttaccataatgaggcaatggcgtttgccgacttgaccaacgagatt
caacaataccttggtaaaagtgacgaggaaattcgggaacgactctcgcagttttacacg
gacctgaacgtcgatggcagctttatttcccttggtgataacacctggggcctgcgtgcc
tggtacccgtacgaatcgatcgatgaagcaacggttggtgaaaccgaagacgaagaagat
cggccaaagaagcgccggcgcaaggtcaatgccttcttggcaggaactgacgacgacgac
gatgtgatcgactacgacaacgatgatccagaagatgaagatctggatgatgatcaaggt
ccagacgatgacgacgattacgaagaagacgactacgatgaggataaccccgttgaagat
gatgacgaggaaaccaacatcgaagatcaactgtctgagcttcacggcgacgaattcggc
gacgatgaagaagaggacgaagaagataaagaagacgacgaggaataa
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