Limosilactobacillus fermentum IFO 3956: LAF_0224
Help
Entry
LAF_0224 CDS
T00699
Name
(GenBank) lysyl-tRNA synthase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LAF_0224
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfe01007
]
LAF_0224
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_0224
Enzymes [BR:
lfe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LAF_0224
Amino acid related enzymes [BR:
lfe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LAF_0224
Transfer RNA biogenesis [BR:
lfe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LAF_0224
Prokaryotic type
Other AARSs
LAF_0224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BAG26560
UniProt:
B2GA78
LinkDB
All DBs
Position
271367..272860
Genome browser
AA seq
497 aa
AA seq
DB search
MANEEHLNDQMVVRREKMQALRDQGVAPFGHRFDPDHDLSTDIRKKYENDSGELLLAQHN
VVTIAGRMIGKRGSGKASFADLLDRGGKIQFYVRQDMVGEEAYKLFKESDLGDFWGITGD
VIKTRMGELTVRAEKITFLSKALRPLPDKYHGLQDPELVYRQRYLDLITNRESFERFQTR
TKIIKAVRRYMDDNGFLEVETPILENIASGAEARPFVTHHNALNIDMYMRIATELRLKRL
IVGGMERVYELGRIFRNEGMDPYHNPEFDTMETYAAYFDFNDVMKETEGIFKAAAGVVAD
DLKITYQGTELDFSTSFKRLHMVDAIKEATGIDFWQEMTVEEARKLADDNGIKYESWWKV
GHIINAFFEEKVQDTLEQPIFIYGHPVEVSPLAKINEEDSRFTDRFELYILGKEYANAFS
ELNDPIDQRKRFEAQAQENAEGNDEAQPIDEDFVEALEYGMPPTGGLGVGIDRMVMLMTD
AKSIRDVLLFPTMRPKK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaagagcatttgaacgaccagatggtggttcgacgggaaaagatgcaggca
ttaagggaccaaggggtggcgccgtttggtcaccgttttgatccggaccacgatttatcc
acggatatccgcaagaagtacgaaaacgatagcggtgaactactgttagcccaacacaac
gtcgtaacgattgcgggacggatgatcggaaaacggggaagcgggaaggcgtcctttgcc
gacctattggaccggggaggcaagatccaattctacgttcgccaagatatggtgggggaa
gaagcctacaagctattcaaagaatccgacttaggggatttctgggggattactggtgat
gtaatcaaaacccggatgggcgaactgacggtgcgggccgaaaagattacctttttatcc
aaggccctccgtccgctgccggataagtaccacggcttgcaggacccagagttagtctac
cgtcagcgttacttggacctgatcactaaccgggaaagcttcgaacgtttccaaaccagg
actaagattattaaagccgtgcgccgttacatggacgataatggcttcttagaggtggaa
acccccatcctagaaaacattgcctccggggctgaggcgcggccgtttgtgacccaccac
aacgccttaaacattgatatgtacatgcgaattgccaccgaactacggcttaagcgccta
attgtcggcgggatggaacgagtttacgaactggggcggatcttccgtaacgaagggatg
gacccgtaccacaaccctgaattcgatacgatggaaacctacgccgcttacttcgacttc
aacgacgtgatgaaggaaacggaagggatttttaaggctgccgctggtgtagttgctgat
gacttaaagattacctaccaaggaacggaactcgatttcagtacctcctttaagcgtctc
cacatggtggatgccattaaggaagcaacgggaatcgacttctggcaagaaatgaccgtt
gaagaggcccgtaagctggctgatgacaacggaattaaatacgagagttggtggaaggtt
ggtcacattattaacgccttctttgaagaaaaggttcaagataccttggaacaaccgatt
tttatctatggtcacccggtagaagtctcaccgttagcaaagattaacgaagaggattcc
cgttttactgaccggtttgaactgtacattttgggtaaggaatacgcgaatgccttctct
gaattaaacgacccaattgatcaacgcaagcgttttgaggcacaagctcaagaaaacgct
gagggtaacgatgaagcccagccgattgacgaggactttgttgaagcactcgaatacggg
atgccgcctaccggtgggctcggggtcggaatcgaccggatggtaatgttgatgacggac
gcaaagtcaattcgcgacgtcttattattcccaacgatgcgaccaaagaagtag
DBGET
integrated database retrieval system
