Limosilactobacillus fermentum IFO 3956: LAF_0257
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Entry
LAF_0257 CDS
T00699
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0257
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LAF_0257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
AAA_22
ABC_tran
AAA_16
GvpD_P-loop
AAA
SLFN-g3_helicase
AAA_14
nSTAND_NTPase5
AAA_5
nSTAND3
AAA_24
NTPase_1
Rad51
ATPase_2
MCM
NPHP3_N
DUF7129
NACHT
DZR
KTI12
zf-RING_10
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
BAG26593
UniProt:
A0ABF7R150
LinkDB
All DBs
Position
323844..325217
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AA seq
457 aa
AA seq
DB search
MAKAKTHFVCQNCGYNSPRYLGRCPNCGQWSTLVEEVEQASTPAAKNATATLTGIVARPQ
RIQEIDTKKTPRVKTRLNELNRVLGGGIVPGSLVLIGGDPGIGKSTLLLQVSGQLSVEHH
KVLYVSGEESASQIKLRAQRLDVSGEDFYIYPETNMEAIRATIDSIQPEFVIIDSVQTMQ
AADVTSAIGSVSQIRAVTAQLMQIAKGQNITVFVVGHVTKGGVLAGPKILEHMVDTVLYF
EGDLHHTYRILRSVKNRFGSTNELGIFEMNTRGLTEVANPSEIFLEERLKDATGSAVVVS
LEGTRPILVEIQALITPTVFGNAQRTATGLNRNRVSLIMAVLEKRANLLLQNQDAYLKAA
GGVKLDEPAIDLAIAVAIASSYRDKGTRPTDAFVGEVGLTGEIRRVSRIEQRVAEAAKLG
FKRILVPKNNLAGWNPPQDIEVVGVTTLGEALKIALG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagccaaaacacactttgtctgccaaaactgcggttacaattcaccgcgctat
ttagggcggtgtcccaattgtggccagtggagtaccttagttgaagaagtcgagcaggca
agtaccccggcggctaaaaacgctacggcaaccttaaccgggattgtggcccggccccag
cgaatccaagaaattgacaccaaaaaaacgccccgggttaagacccgcttaaatgagtta
aaccgggtgctaggtggcggaattgtacctggctcgttggtcttaattggtggggatccc
gggatcgggaagtccaccctgctcttacaagtgtcggggcaactgagcgtggaacaccac
aaggttctttacgtttccggggaagaatcggcctcccaaattaaattgcgggcccaacgc
ttagacgtttccggcgaggacttttatatctacccggaaaccaacatggaagccatccgg
gcgacgattgattccattcagcccgagtttgtaatcattgactcggttcagacgatgcag
gcggccgacgtgacctcggcgattgggtcggtctcccaaatccgggcggtcaccgcccag
ttgatgcagattgccaaggggcaaaacatcacggtcttcgtggttggtcacgtcaccaag
ggtggggtcttagccggtcccaagatcttggaacacatggttgacacggtgctgtacttt
gaaggggacctccaccacacctaccggattttacggtcggtcaaaaaccggtttgggtcc
accaatgagttagggatcttcgaaatgaatacccgcggtttgaccgaggtcgcaaacccc
tcggaaatctttttggaagagcggcttaaggatgccaccgggtcggccgtggtcgtatcc
ctggagggaacccgaccgatcctggttgaaatccaggccttgatcacgccaaccgtcttt
ggaaacgcccaaagaacggcgacaggtttaaaccgcaaccgggtttccttgatcatggcg
gtcctagaaaaacgggcgaacctgctcttacaaaaccaggatgcctacttgaaggcggcc
gggggcgttaagttagacgagccggccatcgaccttgcgatcgcggtggcaattgcttct
tcttaccgggataaggggacccggccgaccgacgccttcgtcggtgaagttggcttaacc
ggggagatccgtcgggtgagccgaattgaacagcgggtggccgaagccgctaaactaggc
tttaagcggattttagtgcccaaaaacaatttagcgggttggaacccgccgcaagacatc
gaagtcgtgggggtaacgacccttggcgaagcacttaaaattgcccttggatag
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