Limosilactobacillus fermentum IFO 3956: LAF_0276
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Entry
LAF_0276 CDS
T00699
Name
(GenBank) cytochrome D ABC transporter ATP-binding and permease components
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LAF_0276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfe02000
]
LAF_0276
Transporters [BR:
lfe02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LAF_0276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
DUF87
AAA_29
AAA_21
GIPC1_GH2
DUF624
RsgA_GTPase
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
BAG26612
LinkDB
All DBs
Position
342130..343881
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AA seq
583 aa
AA seq
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MFNKVRLLRDLKNDQWVRPFLHYYKKTLWLALTLGVLTFVCGAGLMFDSGYLISKAATHP
DNILLIYVPIVLTRAFGIGRPALRYVERLVSHNWVLRMTSAFRKKLYDSLEGDAVFFNSK
YQLGDILGLLSEDVSHIQNLYLRTVFPMIVSWSLYVIIVVGIGFLSPLMGLWVLITFGLM
IFAIPLWSVIINGARQAVEKKTKNDLYTDLTDNVMGITDWVLAERGQEYVNLHNQHEEQL
MKVQHRMHRFEFFRNFVLQMLFILIVVSLLLWAGTYFGGQYGGPANWIAAFVLAAFPLVD
AFAGLPDAAQETNIYADSLERLNNLPKPQATPETAVALNGPFTVKVEDVHYTYPQTTREV
LSGIDLTITPGQKLAILGRSGSGKSTLAALLRGDRTPTKGQITLNGVATATLGDQVADYV
GVINQSPHLFNTTVANNVRIGNENASDEQVWDVLERVGLAEMIKKLPQGLETQVDEAGLR
FSGGERHRLSLARILLKDAPIILLDEPTVGLDPVTEQEVLDTFMTQLQGKTLIWITHHLQ
GVAKMDQVVFIEDGHLAMQGTPAELEVSSARYRHLLAADRGEE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagttcgtctcttacgggatttgaaaaatgaccaatgggtgcgccccttt
ttgcattactacaaaaagaccctgtggctagccctgacgctcggggtattaacctttgtc
tgtggggccgggttgatgtttgactccggttacctgatttcaaaggccgccacccacccg
gataacatcctcttgatctacgtaccaattgtcttgacccgggcctttgggattggccgg
ccggccctacgttacgtggaacggctggtcagccacaactgggtgttaaggatgacctcg
gcctttcgcaagaagctgtatgattccttagaaggtgacgccgtcttctttaacagtaag
taccagctgggcgacatcttggggctcttgtccgaagacgtttcccacatccaaaacctc
tacttacggacggtttttccgatgatcgtttcctggagcctctacgtcatcatcgtggtg
gggattggctttttgtcacctttgatggggctatgggtgctaatcacctttggcctaatg
atctttgcgattccactctggtccgtcatcattaacggggcccggcaggcggtggaaaag
aagactaaaaatgatctctacaccgacctaaccgataacgtgatgggaatcaccgactgg
gtcctggccgaacgggggcaggaatacgttaacttgcataaccaacacgaagagcagttg
atgaaggtgcaacaccggatgcaccggtttgaattcttccgtaacttcgttttgcaaatg
ctattcatcctaatcgtggtcagcttgctcttgtgggccgggacttactttggcgggcaa
tatgggggcccggctaactggatcgccgccttcgtcttagcggcctttccactggtcgac
gcctttgccggtttaccggatgcggcccaggaaaccaacatttacgccgattccttggaa
cggttaaataacctgcctaagccacaagctaccccagaaaccgccgtggccctgaatggc
ccgttcacggtcaaggttgaagacgtccactacacctacccgcaaacaacgcgcgaggtc
ttaagtggtattgatttaacaatcacgcccggccaaaagctggccattcttggtcggtcg
gggtctgggaagtccaccctcgccgccttgttgcggggggaccgaacaccaaccaagggg
caaatcaccttaaacggggtagctacggccacgttgggcgaccaggtggccgattacgta
ggggtgattaaccagtcacctcacctcttcaatacgacggtcgccaataacgtccggatc
gggaatgagaacgccagtgacgagcaggtgtgggacgtgctcgaacgggtggggttagcc
gagatgatcaagaagcttccccaggggctggagacccaggttgacgaagccggcctccgc
ttctccggtggggaacgccaccgcctatctctggcccggatcctgctaaaagacgctcca
atcatcctattggacgagccaacggtcgggctggacccggttacggaacaggaggtctta
gacacttttatgacccagttacagggcaagaccctaatctggattactcaccacctccag
ggggtcgctaaaatggatcaggtggtcttcattgaagatggtcacctcgccatgcagggg
accccggcagaattggaagtcagttccgcacggtaccgtcacctactggcggccgaccgg
ggtgaggagtaa
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