Limosilactobacillus fermentum IFO 3956: LAF_0490
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Entry
LAF_0490 CDS
T00699
Name
(GenBank) thiamine biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe00730
Thiamine metabolism
lfe01100
Metabolic pathways
lfe01240
Biosynthesis of cofactors
lfe04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LAF_0490
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LAF_0490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_0490
Enzymes [BR:
lfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LAF_0490
Transfer RNA biogenesis [BR:
lfe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LAF_0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
ThiI_fer
THUMP
QueC
NAD_synthase
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
BAG26826
UniProt:
B2GAZ4
LinkDB
All DBs
Position
579881..581101
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AA seq
406 aa
AA seq
DB search
MKYDEIMVRYGELSTKGHNKKSFIDRLGSNVRKALHQYDQVKIHPNQDRLHVELNGTDAE
PVMERLKQVFGIQNFSPSLRVEKDFDSVVEAAVAIFKEQVQGPTTFKVETKRADHKFPMG
TFEMNKQLGGALLKAFPTDLSVDVHHPDITLRVEIRLNGIYLTSAKILGAGGLPVGTAGK
GMMMLSGGIDSPVAAYLALKRGVSLEMVHFYSPPYTSEQALAKAKELTGKLAKYSGSIKF
IQVPFTEIQETVKEKVPEGYLMTVQRRLMLRLACALAQKRAGLAVFNGESLGQVASQTME
SMLAIEDVTTMPVLRPVLSYDKNEIIKIAEDIDTYDLSILPYEDCCTVFTPPSPKTKPNL
KRARSYEARLDVEGLMQRALDGIEITEIHAGDEFLNQNQDVFAELL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgatgaaattatggtccgctacggtgaattgtccaccaagggccacaacaag
aagtcattcattgaccgcttgggttccaacgttagaaaggcgctccaccaatacgaccag
gtcaagattcacccgaaccaggaccggttgcacgtggagttaaatgggaccgacgccgaa
ccagtcatggagcggctcaagcaggtctttgggatccaaaacttttccccgtccttgcgg
gtggaaaaggactttgattccgtggtcgaagcggccgtagcgatatttaaggaacaggtc
caggggccgaccaccttcaaggtggaaaccaagcgggccgaccacaaattcccgatgggg
acctttgaaatgaataagcaactggggggcgcccttttgaaggcattcccaaccgactta
tccgtggacgttcaccacccggacatcacgctgcgggtcgaaatccgcttaaacgggatt
tacctgaccagcgccaaaattttaggggccggtggtctgccggtcggcaccgccgggaag
ggaatgatgatgctgtcgggggggatcgactccccggtggccgcctacctagcgctgaag
cggggcgtttccttagaaatggtccacttctactccccgccgtacacctccgaacaagcc
ctggccaaggccaaggaattgaccgggaagttggctaagtactccggctcgatcaagttc
attcaggtgccgtttaccgagatccaagaaacggtcaaggaaaaggtaccggagggctac
ttgatgaccgtgcaacgccgcttgatgttgcgcttggcctgtgccctagcccaaaagcgg
gcgggcttagctgtctttaatggtgagtccctggggcaagtggcttcccagacgatggaa
tcaatgttggcgatcgaagacgttaccacgatgccagtgctgcgtccggtgctgtcctac
gacaaaaacgagatcatcaagatcgccgaagacatcgacacctacgacctgtcgatcttg
ccttacgaagactgctgcaccgtcttcacgccgccttcgccaaagaccaagccaaacctg
aagcgggcccgctcatacgaggcgcgcctagacgtggaaggcttgatgcaacgggccttg
gacggaattgagatcaccgaaattcacgccggcgacgaattcttgaaccaaaaccaagac
gtcttcgcggaattactataa
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