KEGG   Limosilactobacillus fermentum IFO 3956: LAF_0512
Entry
LAF_0512          CDS       T00699                                 
Name
(GenBank) conserved hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lfe  Limosilactobacillus fermentum IFO 3956
Pathway
lfe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lfe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LAF_0512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lfe03019]
    LAF_0512
Messenger RNA biogenesis [BR:lfe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LAF_0512
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B ATP-synt_B KH_2 YycC
Other DBs
NCBI-ProteinID: BAG26848
UniProt: A0ABF7R1Z1
LinkDB
Position
606374..607933
AA seq 519 aa
MNAISLLIAAVAIVVGLIAGYVGRKIVFEQRLTQAKENAAGIIATAQKEAATAKKEAILE
AREESHRYREVVEQELKDRRSEVQKQEERLLQREATLDRKDTSLENRETTISARERKLDQ
KTEQIQKRQQQAADLVEQRQAELEKVAQLSHEEAKKRLLSQLKEELQSERETMIRQSEQE
AELTAEKNAKDLIVAAIQRSAADMVQETTVTVVTLPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVVLSGFDPVRREIAKMALERLIQDGRIHPARIEEAVERARKDMDTQLRE
VGEQTVFDLGLHTMHPDLIKTVGRMKYRTSYGQNVLQHSIEVAKLAGIMAAELGEDVTLA
KRAGLLHDIGKAIDHEVDGSHVELGVELTRKYKENKVVINTIASHHGDVAPTSIIAVLVQ
AADAVSGARPGARSESLEQYIQRLKKLEELANQNSGVDHSYAIQAGREIRVIVKPTKVSD
KQAVTLAHDLKQEIEKQLEYPGHIKVTVIRETRAVDYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgaatgcaatcagcttattaatcgccgctgtcgctattgttgtcggtctaattgccggt
tacgtgggtaggaaaatcgttttcgaacaacgattaacccaggcgaaggaaaacgccgcg
gggattattgcaactgcccaaaaggaggcggcgacggcgaaaaaggaggccattttagag
gcccgagaagaaagccatcgctaccgggaagtcgtggaacaagaactcaaggaccgtcgt
agtgaggtccaaaaacaagaagagcgcttgctccaacgcgaagcaacccttgaccgcaag
gacaccagtctggagaaccgcgaaactacgatcagcgcccgggaacggaagctcgatcaa
aagacggagcagattcaaaagcgtcaacaacaggcagcggatttagtcgagcagcgccaa
gccgagctcgaaaaggtcgcccagctatcacacgaagaggccaaaaaacggctcctttcg
caactaaaagaagagttgcaaagtgaacgggaaacgatgattcggcaaagcgaacaagaa
gccgaattaacggcggaaaagaacgccaaggacttaatcgtggccgcaattcaacgctca
gccgcggatatggttcaagaaaccaccgtgaccgtagtaaccctccccaatgacgacatg
aaggggcggatcattgggcgcgagggccgtaacatccggaccttagaaaccctgaccggg
atcgacctgatcatcgatgacacgccggaagcagtcgtcttatccgggtttgacccggta
cggcgtgagattgccaagatggccctggagcgcttgatccaagacggccggattcacccg
gcccggattgaggaggcggttgaacgggcccgcaaggacatggatacccagctgcgtgaa
gtcggggagcaaacggtctttgacctaggcctgcacaccatgcacccggacctgattaag
acggttgggcgaatgaagtaccggaccagttacggtcaaaacgtcttacagcactcaatt
gaagtcgccaagttagcggggatcatggccgctgagctcggtgaagacgtgaccctcgct
aagcgggccggcctcctgcacgacattggtaaggccatcgaccacgaagttgatggttcc
cacgttgaactaggggtggaactaacccgcaagtacaaggagaacaaggtcgttattaat
acgatcgcatctcaccacggcgacgtggcgccaacctcgatcattgccgtcctggttcag
gctgccgatgccgtttccggggcccgtcctggtgcccgtagtgagtcgttggaacaatat
attcaacgactcaagaagctagaggagttggccaaccaaaatagcggtgttgatcattcg
tacgctatccaggctggccgcgagattcgcgtgattgtcaaaccaaccaaggtttccgat
aagcaagcggtcaccttggcccacgacctcaagcaagagattgaaaagcaacttgaatac
ccagggcacattaaggtgacggtaattcgggaaacccgggccgtcgattatgccaagtag

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