Limosilactobacillus fermentum IFO 3956: LAF_0527
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Entry
LAF_0527 CDS
T00699
Name
(GenBank) DNA mismatch repair protein MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LAF_0527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0527
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LAF_0527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Erp_C
MutS_III
Spectrin_SESTD1
AAA_22
DUF6364
FoP_duplication
Motif
Other DBs
NCBI-ProteinID:
BAG26863
UniProt:
A0ABF7R1V0
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Position
624095..626470
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AA seq
791 aa
AA seq
DB search
MNHKILETLEYGRVKGQLAQFIVSATGRAELAKLEPQTDYTTIHHWVEETEDGADLLRLV
GGIPLPELADVSPQLKRLKVQASLNGTELAQITQVLRTSMAVQNFFEGLVEKKIRLRTID
NLATSLVTIPEVTRRLARSLDPDGRVTDEASTKLHGVRQLITQTEVDIRHELERYTRGKQ
AKKLSDPIITIRNDRYVIPVLAQYRNQFGGVVHDQSASGQTLYIEPGSVVELNNRLRQAQ
IEERQEVRKVLAELSDLVRPYRNDIAQNAQLLGHLDLINAKAKLAAAMKASVPLLNQEGE
VNLRMARHPLIDQEKVVANDIALGKDYQAIVITGPNTGGKTITLKTLGLIQLMAQSGMFI
PANENSTVAIFDNVFADIGDEQSLEQNLSTFSGHMENVKRILEQITANSLVLLDELGAGT
DPKEGAALAMAILDQIGATGSEVVVTTHYPELKVYGYDRAKTINASMEFDQQTLQPTYRL
LLGVPGQSNGIAIAKRLGIEQAVIDEASSLVSDDSQDLNKMIGDLVEQRKRAREENERLQ
ALVKENAATKEELDAKLDRFNEQRDKLLERARSEANHEVSQAKKKANQIIHHLRQLEIQG
ATVKENELIDAQGALNALHKDNPRLNHNSVLQRAKQKHQLKVGDHVNVKSYGQQGVLLNK
RGAHKWEVQLGILKMAIDEADLEKISAKQAKQAEKKHAQPRRMAVRTIQTRQTSARLDLR
GHRYEEAMSELASFIDHALLNNLPSVTIIHGKGTGALRKGTQQYLQSNPRVKNFEYASPS
NGGDGATIAYF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaaccataaaattttagaaaccttagagtacggccgggtcaaggggcagctcgcccag
tttatcgtttcggccacgggacgggcggaactggctaagctcgaaccccaaaccgattac
accaccattcaccattgggtggaagaaacggaggatggggccgacctattacgtttggtc
gggggaattcccctgccggagttagccgacgttagcccccaactcaagcgcttgaaggtg
caagccagcttaaacgggaccgaactggcccagatcacccaggtcttgcggaccagcatg
gcggtgcaaaacttttttgagggcctagtcgaaaagaaaattcgcttgcggaccattgat
aacctggcgacgtcattggtgacgattccggaggttacccggcgcctcgctcgctcactg
gatccggacggccgggtgaccgatgaggcatcaactaagctacatggggttcgtcagttg
atcacccaaaccgaagttgatattcgccacgaactggagcgttacacccggggcaagcag
gccaagaagctgtcggacccgattatcacgatcagaaacgaccgctacgtaatcccagtc
ttggctcagtaccgcaaccagtttggcggggtggtccacgaccaatcagcgtccgggcaa
actctctacattgagccggggagcgtggtggagttaaataaccgcttgcgccaagcccaa
attgaggaacgccaagaggtacgtaaggtcctagcggagttatcagacctggtgcgcccc
taccgcaacgacatcgcgcaaaatgcccagttgctaggccacctcgacttgattaacgcc
aaggccaagttggcggcggcgatgaaggcgagcgtaccgcttttaaaccaggagggtgag
gtcaacttacggatggcccgtcaccccttgatcgaccaggagaaggtggttgccaacgac
attgccctgggtaaggactaccaggcaatcgtgatcacggggccgaacaccggtgggaag
acgatcaccttaaagaccctgggcttaatccagttaatggcccagtcggggatgtttatc
ccggccaacgaaaactcgacggtcgccatttttgataacgtctttgccgacattggggat
gagcagtcgttggaacaaaacctgtcgaccttctctggccacatggaaaacgttaagcgg
atcttagaacaaatcaccgctaactccctggtactcttggacgaactgggggccgggacc
gaccctaaggaaggggcggccctggcgatggcaatcctcgaccaaattggggcaacgggt
agcgaagtcgtcgtgacgacccactacccggaactgaaggtctacggctacgaccgggcc
aagacaatcaacgcctcaatggaatttgaccagcaaacccttcagccgacctaccggctc
ttacttggggtgccagggcagtccaatgggatcgcgatcgccaagcggctagggattgag
caagcggtcattgacgaggcctcatcgttggtctctgatgacagccaggacttaaacaag
atgatcggtgacctggtcgaacaacgcaagcgggcccgggaggaaaacgaacggcttcag
gcgttagttaaggaaaacgcggccaccaaagaggagttagacgccaaactcgatcgcttt
aacgagcagcgcgataagctcttggaacgggcccgttcggaggccaaccacgaggtttcc
caagctaaaaagaaggccaaccagattatccaccacctccgccaactagaaattcagggc
gccacggttaaggaaaatgaattaattgacgcccagggggccttaaacgccctacacaag
gacaacccacgcttaaatcacaacagcgttttacaacgggctaagcaaaagcaccaactt
aaggtgggggaccacgtcaacgtcaagtcctatggccagcaaggggtcttgttaaacaag
cgcggcgcccataagtgggaggtccaactgggaattttgaagatggccattgacgaggcc
gacctcgaaaagatttcggctaagcaggctaagcaagccgagaaaaagcacgctcagccc
cggcgaatggcggtgcggacgattcaaacgcggcaaaccagtgcccggttagacttgcgg
ggtcaccgttacgaagaggcgatgagtgaactggcgtcctttattgaccacgccttgtta
aacaacttgccgtcggtaacgatcatccacgggaaggggactggggccctacgtaagggg
acccaacagtacctccagagcaacccccgggtaaaaaactttgaatacgccagccctagc
aatgggggcgacggggcaacgatcgcctacttttag
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