KEGG   Limosilactobacillus fermentum IFO 3956: LAF_0544
Entry
LAF_0544          CDS       T00699                                 
Name
(GenBank) competence protein
  KO
K02243  competence protein ComGA
Organism
lfe  Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:lfe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lfe02044]
    LAF_0544
Secretion system [BR:lfe02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   LAF_0544
SSDB
Motif
Pfam: T2SSE nSTAND3 AAA_7 AAA_22 ResIII TsaE AAA_11 AAA SRP54 YqeC AAA_16 AAA_30 Rad17 AAA_14 AAA_33 SRPRB NTPase_1 cobW RNA_helicase AAA_2 Zeta_toxin
Other DBs
NCBI-ProteinID: BAG26880
LinkDB
Position
641566..642525
AA seq 319 aa
MESWLRKEMATMIGERVADAYILPHQGRYRLASFERGQVKERRSLTLAGGQQLIAYFKYR
ANMAVTEHRRPQSGGISWPSKEGVVNLRLSTVGDFTGQESLVIRFIYPVSTDYQLLVPTQ
WQNLHRFARQRGLVLFAGPLGSGKTTTMYRLAREVKKEQVVMTIEDPVEIEEPWFIQTQV
NELAGLSYQELLRVSLRHRPHILIIGEVRDPMTAKMAVRAGLAGQLVLATVHARSAGGVY
TRLRQLGVSELDLAQAVTGACYQRLVPLASEGAAVLFDFASPGQEKETRKVTPLWVKHLG
EAVANGKITQETAEEFAAG
NT seq 960 nt   +upstreamnt  +downstreamnt
gtggaaagttggttacgaaaagagatggccaccatgatcggtgagcgggtggccgatgcc
tatattttgccccaccagggtcgctaccggttagcctcctttgaacgggggcaggtaaag
gaacggcgttcgttgacgctggccgggggacaacagctaatcgcttattttaagtaccgc
gccaatatggcggtcactgagcaccggcggccacagtcaggcgggatcagttggcccagt
aaggaaggggtggtcaacctgcgcttatcaaccgtgggtgattttacggggcaagaatcg
ttagtcatccgcttcatctacccggttagcaccgactatcagctcctggttcccactcaa
tggcagaacttacaccggtttgctcgccagcgggggctggtcttatttgccggtccccta
ggatcggggaagacgaccaccatgtaccgtttagcgcgcgaagtcaaaaaagagcaggtg
gtgatgacgatcgaggacccggttgaaatcgaagagccttggtttatccagacccaggtc
aacgaactggcggggttaagttatcaagaactgctacgggtgagtctgcgccaccgtccc
cacattttgatcattggcgaggtgcgcgacccaatgacggcgaagatggcggtgcgggcg
ggtttagccgggcagctagttttagcaacggtccatgcccgtagcgcgggtggggtttac
actcgcctacgccaactgggggtgagcgaactggatttagcccaagcggtaactggggct
tgttaccaacgcctggttcccctagctagcgaaggggcggcggtgttatttgactttgcc
agtccggggcaggaaaaggaaacgaggaaggtgaccccactgtgggtgaaacacttaggg
gaggcggtagcaaatgggaagattacgcaggaaacggcggaagaattcgcggccggataa

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