Limosilactobacillus fermentum IFO 3956: LAF_0627
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Entry
LAF_0627 CDS
T00699
Name
(GenBank) metal-dependent hydrolase of the beta-lactamase superfamily III
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_0627
Enzymes [BR:
lfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LAF_0627
Transfer RNA biogenesis [BR:
lfe03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LAF_0627
Prokaryotic type
LAF_0627
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAG26963
UniProt:
B2GBD1
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All DBs
Position
730320..731252
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AA seq
310 aa
AA seq
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MQIEFLGTGAGSPSKQRNVSSLALRLLEERNAIWLFDCGEATQHQILHTTIRPRKVEKIF
ITHLHGDHIFGLPGFLSSRSFQGGDEPLTIYGPKGIKDFVQTALKVSESRLSYPLKFVEL
TGDGEVFKDQTFTVTARRLDHKIASFGYRVEEAAHPGELMVEKVRQAGIPSGPLYGQLKR
GEVVTLPDGRTVDGHDFIGAPQPGRIVAILGDTRVTDNAVKLAKGADVLVHEATFAKNEQ
RLAHNYYHSTSVQAATVAKKAGAQRLLLNHISARYVGRYANELAYQVRDIFEQTRVVNDL
DVIEIPFKER
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaatttttaggaactggggcggggtcgccaagtaagcaacggaacgtttca
agcctggccctgcgcctgttagaggaacgcaacgccatttggctctttgactgcggggag
gcgacccaacaccagatcctgcacaccaccattcgcccccgcaaggtggaaaagattttc
atcacccacctgcacggcgatcacatctttggtttgcccggcttcttgtcgtcgcgctcc
tttcagggcggcgacgaaccgctaaccatttacggacccaaggggattaaagactttgtg
caaaccgccctcaaggtgtcggaatcgcgcctgtcttacccgctcaagttcgtggagctg
actggcgatggcgaggtctttaaggaccaaaccttcaccgtgaccgcccggcggctggac
cacaagattgccagctttggctaccgggtggaagaggcggcccaccctggtgaactgatg
gttgaaaaggtacgccaagctgggattccgtcggggccactgtacggccaactcaagcgc
ggtgaggtggtgaccctgccagacggccgcacggtcgatggccacgacttcatcggggcg
ccgcaaccgggccggatcgtcgctattttaggcgatacccgggtgaccgataacgccgtt
aagttagctaagggcgccgacgtcctagttcacgaggcgacctttgccaaaaacgagcaa
cgcttagcccacaactactaccactcaaccagcgtccaggcggccacggttgccaaaaag
gcgggtgcccagcgcttattgctcaaccacatttcggcgcgttacgtcggcaggtacgcc
aatgagctggcctaccaagtgcgggacatttttgagcaaacccgggtggtgaatgattta
gacgtcatcgagattccttttaaggaaaggtaa
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