Limosilactobacillus fermentum IFO 3956: LAF_0654
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Entry
LAF_0654 CDS
T00699
Name
(GenBank) repressor
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfe03000
]
LAF_0654
Transcription factors [BR:
lfe03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LAF_0654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_IclR
HTH_10
HTH_DeoR
HTH_26
HTH_Tnp_ISL3
HTH_Crp_2
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
BAG26990
UniProt:
A0ABF7R1P2
LinkDB
All DBs
Position
complement(757018..758007)
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AA seq
329 aa
AA seq
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MEKRRQVKLEDVAALAGVSKTTVSRVLNNRGYLSEATKQRVHEAMEQLHYRPNAIARQLF
TQKTNLVGLVFPTVNDPFFGQLEAGLDECLYENSYRTLMGNSQNNPQKEEQYLQLLLNHQ
IDGLIVGAHNQAMPDYLQTNLPIVSIERAVAPQIPVVASDNYRGGQLATQRLLDAGCQHI
IHTNYPKDVMTTNQDRRKAYEDLMSQAGYPAITYEVNYDTPMEEKKAIFARLFDEHPEVD
GIFADNDTNAGLIIQVAKARGRRVPEDLKVVGFDGADGTRILFPELTTVQQSIDQMAAVA
VNLLEQQIAGQTNVESVTLPVTLLEGTTG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaacgcagacaagttaagttagaagacgtggcggccctagccggggtctccaaa
acaacggtttcccgggtcctcaacaaccgtggctacctgagcgaagccaccaagcaacgg
gtccacgaggcaatggaacagctccattaccgccccaacgcaatcgcccgccagctcttt
acccaaaagaccaacctggtcggcctggtcttcccgaccgtcaacgaccccttctttggc
cagcttgaagccgggttggacgagtgcctgtacgagaacagctaccggaccctgatgggt
aacagccaaaacaacccgcaaaaagaagagcagtacttacaattgctcttaaaccaccag
attgacggcctgatcgtcggcgcccacaaccaggcgatgccggattacttgcagaccaac
ttaccgatcgtttcgattgaacgcgcggtcgccccgcaaattccggtcgtcgcctcggat
aactaccgcggtggccagctggcgacccagcggctgctagacgccggttgccaacacatt
atccacaccaattaccctaaggacgtcatgaccaccaaccaggaccgccgcaaggcctac
gaggatctgatgagccaggccggttaccccgccattacctacgaggttaattacgacacc
ccgatggaggaaaaaaaggccattttcgcccgcctctttgacgaacaccccgaagtcgac
ggcatctttgccgacaacgacaccaacgccgggctgatcatccaagtggccaaggcccgt
ggccgccgggtccccgaggacctcaaggtggtcggcttcgacggcgcggacggcacccgg
atcctgttcccggaactgacgaccgtccaacagtcgatcgaccaaatggcggcggtcgcc
gttaacctgttagaacaacagattgccggccaaaccaacgtcgaatccgtgaccctgccg
gtaacccttttagaaggcaccacgggctag
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