Limosilactobacillus fermentum IFO 3956: LAF_0735
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Entry
LAF_0735 CDS
T00699
Name
(GenBank) pseudouridylate synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_0735
Enzymes [BR:
lfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LAF_0735
Transfer RNA biogenesis [BR:
lfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAF_0735
Prokaryotic type
LAF_0735
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAG27071
UniProt:
A0ABF7R224
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All DBs
Position
860287..861183
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AA seq
298 aa
AA seq
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MDGIIPLYKERGMTSFDCIARLRRILHTKKVGHSGTLDPNVDGVLPIAIGNATKAVEYLM
ASGKEYAGELTIGLATTTEDLDGEVVDQKPVPAPIAREMIAEKMAEMTGEITQVPPMYSA
VKVKGKRLYEYARAGETVERPKRQVTIDQFTLLATSYDQERQVQRVRFKVACSKGTYVRT
LAVDLAAKLGYPGVMSSLTRLKSGGFTLDQTLSLDDIQDMVTASGMVNLYPLDYAVKDLP
HLALNAEQWQAVQNGGWLKQSEVTPQEPRVVVTYQGDTKAVYKHVERHYQPEKMFKNS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacggaatcattccactttataaggagcgggggatgacctcgtttgattgcatcgcc
cgattgcggcggattttacacaccaagaaggtcggccactcggggaccctggatcccaac
gtggacggggtcttaccaattgcgatcggcaacgccaccaaggccgtggaatacctgatg
gcctcgggtaaggagtacgccggcgaattgacgattgggctagcgacgaccaccgaagac
ctcgatggggaagtggtcgaccaaaagccggtgccggcgcccatcgctcgagaaatgatt
gcggaaaaaatggccgaaatgaccggggaaatcacccaggtgccgccgatgtattcggcc
gtgaaggtcaaggggaagcgcttatacgagtacgctcgggctggtgaaaccgtggaacgc
cctaagcgccaagtgacgatcgaccagttcaccctgctagccaccagttacgaccaggaa
cggcaagtccagcgggtccgctttaaggtagcctgctccaaggggacgtatgtgcggacc
ctggccgtcgacctggccgccaagttgggctacccgggggtgatgtcgtctttgacccgg
ttaaagtcgggtggcttcaccttggatcagaccctgagccttgatgacatccaagacatg
gtcacggcgagcgggatggtcaacttgtacccgcttgattacgccgtcaaggacctgccc
cacctggcactcaacgccgagcagtggcaagccgttcaaaacggtggctggctcaagcaa
agcgaggtaaccccccaagagccgcgggtggtggttacctaccaaggggacaccaaggcc
gtttataagcacgttgagcgccactaccaacccgaaaagatgtttaagaatagttag
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