Limosilactobacillus fermentum IFO 3956: LAF_0841
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Entry
LAF_0841 CDS
T00699
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAF_0841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0841
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LAF_0841
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LAF_0841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BAG27177
UniProt:
B2GBZ5
LinkDB
All DBs
Position
986873..987691
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AA seq
272 aa
AA seq
DB search
MARVNEPFEGVIMYRRDYRERDLLVKILTDRRGPLMFFVRGAKRKGFKLASDILPFTYGS
YVGILADEGLSYIVSAQETHHLTGIGADLNRNAYATYLLELVDQAFEEGRALGGWYKQVM
AALNLINTGRDPQVVVNVLEVQLLNRFGIAPVWDRCVVCGRSDLPLDYSEKMGGMLCLHH
FAEDPYRFHLTPKTVAYLRLFATLNLAKVDQVHVDEATKRQLGRTLDKIYDDQLGLRLKS
KRFINEMDSWTNRLLTARKNPGTDDEKKPAGS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggtcaacgaaccctttgaaggggtgatcatgtaccggcgcgactaccgggaa
cgcgacctcctggttaagattttgacggaccggcgcggcccgctgatgttttttgtccgc
ggggccaaacgcaagggctttaagttggcgtcagacattttacccttcacctacggcagc
tacgtggggatccttgccgacgagggcttgtcttacatcgtctcggcccaagaaacccac
cacctaaccgggatcggcgccgatttaaaccgcaacgcctacgcgacttacctgctagaa
ctggtcgaccaggcctttgaagaggggcgggcgctgggcggctggtacaagcaggtgatg
gcggccctaaacttgatcaacacggggcgcgacccccaggtagtcgtgaacgtgttggag
gtccaactcctcaaccggttcgggatcgccccggtctgggaccggtgcgtggtgtgcggg
cgcagtgatttgccgctggattactcggaaaagatgggcgggatgctgtgcctccatcac
tttgcagaggacccctaccgcttccacctcacccccaaaaccgtcgcctacctccggctg
tttgcgacccttaacctggccaaggtcgatcaggtacacgtagacgaggcgaccaagcgt
caattaggtcggacgctggacaaaatctacgacgaccagttgggcttgcgccttaagtcc
aagcgcttcatcaacgaaatggattcctggaccaaccggctcttgaccgccagaaagaat
ccggggacggacgacgaaaaaaagccggccgggagttga
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