Limosilactobacillus fermentum IFO 3956: LAF_0854
Help
Entry
LAF_0854 CDS
T00699
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Pathway
lfe00300
Lysine biosynthesis
lfe00470
D-Amino acid metabolism
lfe01100
Metabolic pathways
lfe01110
Biosynthesis of secondary metabolites
lfe01120
Microbial metabolism in diverse environments
lfe01230
Biosynthesis of amino acids
Module
lfe_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LAF_0854
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAF_0854
Enzymes [BR:
lfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LAF_0854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAG27190
UniProt:
A0ABF7R244
LinkDB
All DBs
Position
1003542..1004861
Genome browser
AA seq
439 aa
AA seq
DB search
MNSQIEPEQINDQGHLTIGGVDSLELAAKYQTPLVVYDVAAIRHQIRAFKKVFAKNQVAA
EVSYASKAFSAIAIYQVVAQEDGHIDVVSGGELTTAIKAHFPMEKVSFHGNNKSKEELEL
AVQNGVGMIIIDNFHEIDLLGEVLDEQDATATVSLRITPGIAAHTNEYIQTGQVDSKFGF
DLESGQADRALEEVLANPRLKVVGLHAHIGSQIFEVVGFEGVAKKLVDVAEHWHEEFGFQ
TRVLNVGGGFGIRYVQEDQPLPPEEFVDAIIKAVKKEVAKKGLSMPAIWIEPGRSIVGPA
GYSLYTVGSRKDLPGYQPFVTVDGGMGDNIRPALYQAAYETVYAKDPRQKPEETVRIAGK
YCESGDILARDQALPKTKPGDLLVMLDTGAYGYAMASNYNRNPRPAVVFVENGHAQLVIQ
RESWADTCRLDLPLASEDK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacagattgaaccagaacagattaacgatcaggggcacctaacgattggcggc
gttgacagccttgaattagcggccaagtaccaaacgcccctggtcgtgtacgacgtagcg
gcgattcgccatcaaatccgcgcctttaaaaaggtctttgccaaaaaccaggtggcagcg
gaggtctcttacgccagcaaggcctttagcgccatcgccatttaccaggtggtggcccaa
gaggatggccacattgacgtggtctccggtggcgaattaacaacggccatcaaggcgcac
ttcccgatggaaaaggttagtttccacggtaacaacaagtctaaagaagagctggaattg
gccgtccaaaacggggtcgggatgatcatcatcgataacttccacgagatcgacttgctg
ggcgaggtcttagatgaacaagacgccaccgcgaccgttagcctgcggatcacccccggg
attgccgcccacaccaatgagtacattcaaaccggccaggtagattccaagtttggcttt
gacctggaatcggggcaagcggaccgggccctagaagaggtcttggccaacccccggctc
aaggtggtcggcctccacgcccacatcggctcccaaatctttgaggtcgtgggctttgaa
ggggtggccaagaagttagtggacgtcgccgagcactggcacgaggagtttggctttcaa
acgcgggtcttaaacgtcggcggtggctttggaatccgctacgttcaagaagaccaaccg
ctcccgccggaagaatttgtcgatgcaatcatcaaggccgttaaaaaggaggtcgccaaa
aagggcctgtcaatgccggcgatttggattgagccggggcgctcgatcgttggaccggcc
ggctacagcctgtacacggttggttcacgaaaagacctcccgggctaccagcccttcgtg
accgttgacggtgggatgggggacaacatccgcccggccctttaccaggccgcttacgaa
acggtgtacgctaaagacccccgtcaaaaaccggaagagaccgtcaggattgccggtaag
tattgcgaatccggcgacatcttagcaagggatcaggccctccccaaaaccaagccgggc
gacctcttggtaatgctagacaccggagcgtacgggtacgcgatggcctctaactacaac
cggaacccccgcccggcggtggtcttcgttgaaaacggccacgctcaactggtcatccaa
cgcgaaagctgggcggatacctgccggctcgacttaccgctcgcaagtgaagataaataa
DBGET
integrated database retrieval system