Limosilactobacillus fermentum IFO 3956: LAF_0882
Help
Entry
LAF_0882 CDS
T00699
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfe03032
]
LAF_0882
03036 Chromosome and associated proteins [BR:
lfe03036
]
LAF_0882
03400 DNA repair and recombination proteins [BR:
lfe03400
]
LAF_0882
DNA replication proteins [BR:
lfe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LAF_0882
Chromosome and associated proteins [BR:
lfe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LAF_0882
DNA repair and recombination proteins [BR:
lfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LAF_0882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAG27218
UniProt:
A0ABF7R2S4
LinkDB
All DBs
Position
1033069..1033344
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELVTNVATATGLTKKDATAAVDAVFSSIQASLAKGEKVQLIGFGNFEVRERAARK
GRNPQTGQEIQIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaggcagaattagttaccaacgttgcaactgcaaccggtctgactaagaag
gatgcaaccgcagctgttgacgcagttttcagctccatccaagcttccttggctaagggt
gaaaaggttcaactgatcggctttggtaacttcgaagttcgtgaacgtgctgcccgcaag
ggtcgtaacccacaaactggtcaagaaatccaaattcctgcaagcaaggttccggcattc
aagccaggaaaggcgcttaaggacgccgttaagtaa
DBGET
integrated database retrieval system
