Limosilactobacillus fermentum IFO 3956: LAF_1180
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Entry
LAF_1180 CDS
T00699
Name
(GenBank) elongation factor G
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
lfe01504
]
LAF_1180
Antimicrobial resistance genes [BR:
lfe01504
]
Gene variants
Tetracycline resistance genes
Others
LAF_1180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFG_III
EF-G_D2
RF3_C
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
BAG27516
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All DBs
Position
complement(1358237..1360171)
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AA seq
644 aa
AA seq
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MSQIVTGLVAHVDAGKTTLSEALLYHAGVTRQLGRVDKGSAFLDPDQLEQQRGITIFPHQ
AELSFGDLKLTLLDTPGHIDFLAATERVLAVLDYAILVVSAPAGVQATTRILWDLLDKYQ
VPTFVFVNKMDAPGVDQAAVLAQLQDELDPGCLPFKDPAAQFEELALLDEGVMDDYLTNG
EITPAQLRSLIKNRRAFPVYFGAALKDEGVADLIKGLTEWTQTPTPTPDFGARVFKVSHD
ERGNRLTWLRVTGGNLRAKAELLPGQKADQLRVYNGAKATVVQEVGPGQVCTVAGPTSTV
PGQGIGAVEEQAQPRFRPVLTYGLDQRGAPFDQCLAALRQLEDEEPLLGVVDDPATQRLY
VQVMGEVQLEILTQRLEEEFGLTVGFDEGRIRYQETLTTPIEGVGHFEPLRHYAEVHLLL
EPGARGSGLTFASQCHVDVLSNAWQGQILTALKQRAHRGILVGAPLTDVKVTLVGGKGSI
VHTVGGDFRQAAWRALRQGLMEAGRAGNQLLEPWYNFQLLVPTEAVGHALTDLQRFGGEV
SQPQAGPGDLVRLEGSGPVAKLRDYAATVRAYTHGQGQLTLTPAGSRPVADPTPLIEAAN
YDPVGDLANTPDSVFCAHGAGYPVTWDQVPQTMHVPYQTTAQPR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaatcgtcaccgggctggtcgcccacgttgacgccgggaagacaaccctatcc
gaagccctcttgtaccacgccggggtcacccgtcaactgggccgggtcgataaggggtcg
gcctttttggaccccgatcaattagaacaacagcgggggatcacgatcttcccccaccag
gccgagctcagctttggtgacttaaaactcaccctcctagatacgcccgggcacatcgat
ttcttggcggccaccgagcgggttttagcggtgctcgattacgccatcctggtggtgtcc
gctcccgccggggtgcaagcgacgacccggatcctgtgggacctcctggataagtaccag
gtgccaaccttcgttttcgtcaataagatggacgcccccggggtggaccaggcggcggtc
ttagcgcagttgcaagacgagttagaccccggttgcctgccctttaaagaccccgctgcc
cagttcgaggagctcgccctcctagatgaaggggtgatggacgattatctgacgaacggt
gaaatcactcccgcccagctccggagcttgatcaaaaaccggcgcgccttcccggtttac
tttggcgccgccctcaaggacgagggagtggcggacctgattaaggggttaacggagtgg
actcaaacgcccaccccgacgcccgattttggcgcccgggtttttaaggtttcccacgac
gagcggggcaaccggctcacctggctgcgggtgaccggcggtaacttgcgggccaaagcg
gagttgctgccggggcaaaaggccgatcagctccgggtctacaatggcgctaaggccacc
gtggtgcaggaggtcggcccagggcaggtttgtacggtggcggggcccactagcaccgtg
ccgggccagggaatcggggcggttgaagagcaggcccagccccgctttcggccggtcttg
acctacgggttggatcaacggggagcgccctttgaccaatgtttagccgccctccgtcaa
ttggaagacgaggaaccactgttgggcgtcgtggacgacccggcgacccagcgcctttac
gtccaggtgatgggggaggtccaactagaaatcctgacccagcgcttagaagaggaattt
ggcctaacggtgggctttgacgaggggcggatccgctaccaagaaaccctgaccaccccg
atagaaggggtcggccacttcgaacccctgcgccattacgccgaggttcacctcttgctt
gaaccgggagcccgtgggagtggcttgaccttcgccagccagtgccacgtcgacgtctta
tcaaacgcctggcagggccaaattttgaccgccctcaagcaaagggcccaccgggggatc
ctagtcggcgccccgctaaccgacgtcaaggttaccttggtcggtggtaagggcagcatc
gttcacaccgttggcggcgacttccgccaggcggcttggcgggccctgcgccaggggcta
atggaagctggccgggcgggcaaccaactgctagaaccctggtataactttcagttactg
gtccccaccgaggcagtcggccacgctttgacggacctgcaacgctttggcggtgaagtt
agccaaccccaagccgggcctggcgacttggtgcgcttggaggggagtggcccggtcgct
aagttgcgcgattacgcggcgacggtgcgggcctacacccacggccaggggcaattaacc
ctgaccccggcaggtagccgaccggtagcggacccaaccccactgatcgaggctgccaat
tacgatccggtgggcgacttggctaacacgccggactcggtcttttgcgcccacggggct
ggttacccggtcacctgggatcaggtcccccaaacgatgcacgtgccctaccagacgacg
gcccagccgcggtag
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