KEGG   Limosilactobacillus fermentum IFO 3956: LAF_1234
Entry
LAF_1234          CDS       T00699                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lfe  Limosilactobacillus fermentum IFO 3956
Pathway
lfe02024  Quorum sensing
lfe03060  Protein export
lfe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lfe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    LAF_1234
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LAF_1234
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LAF_1234
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lfe02044]
    LAF_1234
Enzymes [BR:lfe01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     LAF_1234
Secretion system [BR:lfe02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   LAF_1234
  Eukaryotic Sec-SRP protein
   LAF_1234
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA AAA_33 AAA_16 6PF2K AAA_30 cobW MMR_HSR1 AAA_31 AAA_17 AAA_19 TsaE ResIII NPHP3_N DUF3516 nSTAND3 AAA_18 GTP_EFTU AAA_24 APS_kinase ATP_bind_1 NACHT AAA_14 AAA Thymidylate_kin LTXXQ SRPRB
Other DBs
NCBI-ProteinID: BAG27570
UniProt: A0ABF7R339
LinkDB
Position
complement(1418229..1419683)
AA seq 484 aa
MKLLGEKHMAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDF
VKTVREKAAGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGA
GKTTTAGKLAKHLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEI
VRQGMEVAKEKHNDYVIIDTAGRLQIDEQLMEELAKIKELAKPDEILLVVDAMTGQNAVN
TAQGFDDQLDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMA
SRILGMGDMMTLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLK
MMPGMANNPALQNINLDPKQFAHIKAIIYSMTPEERENPDMMNPSRRRRLAAGSGRPIVE
VNRMIKQFNQMRKMMRQVTNGNLSGMENLMGGQMPGGRLGKLAMNRMARQMKKNKKKRLK
KKKR
NT seq 1455 nt   +upstreamnt  +downstreamnt
ttgaaattattaggggagaaacacatggcatttgaaggtttaacggaacgcctacaaaag
gcaatggaaaaactgcggcgtaagcccaaggtgaccgaagccgatttacgcgaaacgatg
cgtgaaatccggctcgccctgctggaagccgacgttaactttaaggtcgttaaagacttc
gtcaagacggtgcgcgaaaaggctgccggcgcggaggttttaaagggcttaaatccggct
cagcaaatcgtcaagattgttaacgatgaactgaccgaaatgatgggtgaaacggcaacg
cccctcaataaatccgcccacatcccgaccgtcatcatgatggtcgggctgcaaggggcc
gggaagacgacgacggccggtaagttggccaagcaccttaaaaaagaagaaaatgcccgc
ccactcttcattgcggccgacgtttaccggccagccgccattacccagttgcaacaagtg
gccgctagcattgacgtgccggtctttgaaatggggaccgacgtcgatccggtcgaaatc
gtgcgccaggggatggaagtcgctaaggaaaagcacaacgactacgtgatcatcgatacg
gccgggcgcctgcaaatcgatgaacaactgatggaagaactggctaagatcaaggaactc
gctaagccagacgaaatcctcctggtggtcgacgccatgaccgggcaaaacgccgtcaat
actgcccaagggtttgacgaccagttagacatcactggggtagtcttgaccaagttggat
ggggacacccgtggtggggccgccatgtccatccgggccgtcaccggtaagccaattaag
tttgtcggtgaaggggaaaagatggacaacttggacgtcttccatccggaccggatggcc
tcccggatcctggggatgggggacatgatgaccctgatcgaaaaggcccaggaaaacttt
gaccaggaacaagccacccaggcgatggctaagatgaaggaaaattcctttgatttcaac
gacttcttggaccaaatggaccagatcactaagatgggaccgctggaagacctcttgaaa
atgatgccggggatggccaacaacccggccttacaaaacatcaacctggacccgaagcag
ttcgcccacatcaaggcgattatctactcgatgacccccgaggaacgggaaaacccggac
atgatgaacccaagccggcgccggcggttagcagccgggtccgggcggccaatcgttgaa
gtcaaccggatgatcaagcagtttaatcaaatgcgcaagatgatgcgccaggtcaccaac
gggaacctcagtgggatggaaaacctgatgggcggccagatgccaggcggtcgcctcggt
aagttggcgatgaaccggatggcccggcaaatgaagaagaataaaaagaagcgcctgaag
aaaaagaagcgctaa

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