Limosilactobacillus fermentum IFO 3956: LAF_1330
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Entry
LAF_1330 CDS
T00699
Name
(GenBank) conserved hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfe03019
]
LAF_1330
Messenger RNA biogenesis [BR:
lfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAF_1330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
BAG27666
UniProt:
A0ABF7R3X6
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All DBs
Position
complement(1507791..1508747)
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AA seq
318 aa
AA seq
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MEIGNLTSGVATEGVVLIKDAQLKTTRTGNPFLALRFADRTGEISGNLWDATENQVAQFK
AGVVVELAGQVETYQDQLQFRIQELRLASPEEGQPEDFVPRVAETDGELKDDLRPFLAAI
HQVEWATIVNHLFKKYGAPFFNFPAAKVNHHALVGGLAFHTLSILRLAKNVCDQYPGINR
ELLYAGALLHDMGKVIELSGPVATQYTTTGNLLGHISIVDGEIVACCQEVGLLPTNPQVV
LLRHVILAHHGLREYGSPVEPELMEAEVLHRLDELDAAITEINGALEQTAPGEFSPRQFA
LGRRQFYRLPTGQDTKKA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagattggtaacttaactagcggggtggcgaccgaaggggtggtactgattaaggac
gcccagttaaagacgacccggaccgggaacccctttttagccctgcgctttgccgaccgg
accggtgaaatcagcggtaacctttgggacgcaaccgaaaaccaggtcgcccaatttaag
gccggggtggtggtggagctcgccggccaggtcgaaacctaccaggaccagttgcagttt
cggatccaggagctgcgcctggctagcccagaggagggccaaccggaagactttgtgccc
cgggtggcggaaacggacggggaactaaaggatgacctgcggccctttttagcggccatt
catcaggttgaatgggcgacgatcgttaatcatttgtttaaaaaatacggagcgcccttc
tttaacttcccggcggccaaggtcaaccaccacgccctggtcggtgggttggcctttcac
accctgtcgattttgcgcctggctaaaaacgtttgcgaccagtacccggggatcaaccgg
gaactcctgtacgccggcgcccttttgcacgacatgggtaaggtaatcgagttgtccggc
ccggtagcgacccagtacaccacgaccgggaacttgttgggccacatttccatcgttgat
ggcgaaattgtcgcctgttgccaagaggtcggtttattgccgaccaacccccaggtggtc
ttgcttcgccacgtcatattggcccaccacggcctgcgtgagtacgggtcccccgttgaa
ccggagctaatggaagcggaggtcttacaccgcctagatgagctcgatgcggcgatcacc
gaaattaacggggcgttagagcaaaccgccccgggtgaattttcgccccgccagtttgcc
cttggccgccggcagttctaccggctcccaaccggacaagacacgaagaaagcgtga
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