Limosilactobacillus fermentum IFO 3956: LAF_1469
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Entry
LAF_1469 CDS
T00699
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfe03009
]
LAF_1469
Enzymes [BR:
lfe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LAF_1469
Ribosome biogenesis [BR:
lfe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LAF_1469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
Methyltransf_25
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
Methyltransf_12
N6_N4_Mtase
UPF0020
RrnaAD
Ubie_methyltran
Methyltransf_23
Methyltransf_32
CMAS
SPMIP4-like
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
BAG27805
UniProt:
A0ABF7R4M4
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Position
complement(1672803..1674179)
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AA seq
458 aa
AA seq
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MSKVQLPVHKNETVTGTVLDLTYQGNGVVKVDHYPIFVPNTLPGEEVTVKVTKVTKNFAW
GKLISIEKKSPDRIDDPNWAYLQTGIAPLGNLTYPAQLKFKQRQIQKLLEKAHLNLEVAE
TLGMDQPFGYRNKAQVPVRMVKGQPTTGFYKRGSHDLVPIEDFYIQDPAIDQTVLVVRDL
LRKYQVPAYDEETHRGVIRTVMVRRGYYSHQVMVVLVTNGEHFPHVAEITREISERVPGI
KSIVQNVNDKRTNVILGTKNHLLWGEPTIHDNLLGIDFTISPLSFYQVNPQQTERLYQTA
IENAGLDGSQTVIDAYCGIGTISLAVAKHAKHVYGVEIVPAAIADAKQNAANNGIENATF
VVGKAEEQFAKWQAEGLKPDVVIVDPPRKGLDAQLIEATGKMAPQKVIYVSCNPATLVRD
LQRFAEQGYHVTKPIQPVDQFPQTTHVESVTVLERTEK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtgcaactaccagttcataaaaacgaaacggtcacggggacggtcctcgac
ctgacttaccaagggaacggggtcgtcaaggttgatcactacccaatttttgtacccaac
accttgccgggcgaagaggtaacggtcaaggtaactaaggtgaccaagaacttcgcctgg
ggcaagctgatcagcattgaaaagaagagcccggaccggatcgatgaccccaactgggcc
tacctacagacggggattgcgccgttagggaacctgacttacccggcccaactcaagttt
aagcagcgtcaaattcaaaaactcttggaaaaggcccacctaaacttagaagtggccgaa
acgctggggatggaccagccctttggttaccgcaataaggcccaagtcccggtgcggatg
gtcaagggccaaccgacgaccggtttttacaaacgtggtagccatgacctggtgccaatt
gaagacttttacatccaggacccggcaattgaccaaaccgttttggtggtccgcgacctc
ttgcgtaagtaccaagtgccggcttacgatgaagaaactcaccgcggcgtaatccggacg
gtgatggtccgccggggctactacagccaccaggtgatggtggtcctggtcactaacggg
gagcatttcccgcacgtcgcagaaattacccgggaaataagtgaacgggtgccgggaatt
aagagcatcgtgcaaaacgtcaatgataagcggaccaacgtcattttgggaacgaagaac
cacctgttgtggggggaaccaaccatccacgacaacctcttggggatcgacttcacgatt
tcgccgctctccttttaccaggtcaacccgcaacaaaccgagcgcctctaccagaccgcc
attgaaaatgccggactagatggaagccagaccgttatcgatgcttactgtgggattggg
acgatctctttagccgtggctaagcacgccaagcacgtttacggggtcgaaatcgtgccg
gccgccattgcagacgccaagcaaaacgccgccaataatgggatcgaaaatgcgaccttt
gttgttggcaaggccgaagagcagtttgccaagtggcaagccgagggtctcaaacctgat
gtggtgattgttgacccaccgcgcaagggcttggatgcccaattgattgaggccaccggt
aagatggcgccccaaaaggtgatttacgtctcctgcaacccggcgactttggtccgcgac
ttacaacgcttcgccgaacagggctaccacgtgaccaagccgatccaaccggtcgaccag
ttcccacagacgacgcatgtcgagagtgttactgtgctggaacgtacagaaaaatag
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