Limosilactobacillus fermentum IFO 3956: LAF_1692
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Entry
LAF_1692 CDS
T00699
Name
(GenBank) pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfe03009
]
LAF_1692
Enzymes [BR:
lfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LAF_1692
Ribosome biogenesis [BR:
lfe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LAF_1692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Motif
Other DBs
NCBI-ProteinID:
BAG28028
UniProt:
A0ABF7R4N9
LinkDB
All DBs
Position
complement(1924099..1924983)
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AA seq
294 aa
AA seq
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MEYRWQIEERLPVDQEATPLRHLLQRQWLLPKRLVHYLRSRRQVLVNGSYRPVSKTVAAG
DVITLNFSGDEFRTPDSSYLPDPGPLTVLYENRDLLVVDKPAGIKSHPNQAGEVGTLMNR
VAAYLEGTNDAAYMVHRLDQETSGAMIVAKNPVVVPILDRLISTGEIHRDYLALVAGVPN
PARGIWDLPLGQDPTDVRKRKVFGKNAQPARTHYRTLAVNDDRALVVLNLETGRTHQLRV
HLAAAGCPIVGDPLYGTVAAPRMYLHGVAQELVLPFSLKRERIVAKIPDDFPQF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcgctggcaaatagaagaacgcctgccggtggatcaagaggcaacgccctta
cggcaccttttgcagcgccagtggctgttgcccaagcgtttggtccactacctgcgcagt
cgccgtcaggtcctagtcaacggctcctaccgtccggtgtcgaagacggttgcggctggc
gacgtgatcacgcttaatttttccggcgacgagtttcgcacgcccgattcatcgtacctt
cccgatccgggaccgttgaccgtcctgtacgaaaaccgggacctcttggtggtcgacaag
ccggccggaattaaaagccaccccaaccaagcgggcgaagtcggcaccctgatgaaccgg
gtggcagcctatttagaggggactaacgacgccgcctacatggttcaccgcttggaccaa
gaaaccagcggggcgatgatcgtggccaaaaatccggtggtggtgccgattttagaccgg
ttgattagtaccggcgaaattcaccgtgactacttggccctggtggccggggtgccgaac
ccggcccgcgggatttgggaccttcccttaggacaggacccgaccgacgttcgtaagcgc
aaggtcttcggcaaaaacgcccagcccgcccggacccattaccggaccttggccgtcaat
gacgaccgggcgctagtggtgttgaacctcgagaccgggcggacccaccagctacgggtg
cacttggcggcggctggctgcccgattgtgggcgatccgttatacggtacggtggcggcc
ccccggatgtacttgcacggggtggcgcaagaattggtgctccccttttctttaaaacgg
gaacggattgtggctaaaatccctgacgatttcccccagttttga
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