Limosilactobacillus fermentum IFO 3956: LAF_1839
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Entry
LAF_1839 CDS
T00699
Name
(GenBank) GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lfe
Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:
lfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfe03016
]
LAF_1839
Transfer RNA biogenesis [BR:
lfe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LAF_1839
Prokaryotic type
Methyltransferases
LAF_1839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
cobW
Csa3_N
AAA_16
Ras
Roc
AAA_29
AAA_15
ABC_tran
TniB
Motif
Other DBs
NCBI-ProteinID:
BAG28175
LinkDB
All DBs
Position
complement(2094299..2095687)
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AA seq
462 aa
AA seq
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MANSEQDTIAAISTPVGEGGISIIRVSGDQALDVVSRIFKGKDLHQVKSHTINYGHIIDP
ASGETVDEVMVSVMLAPKTYTKEDVVEINCHGGLLATNRALQLTLTNGARLAEPGEYTKR
AFLNGRLDLSQAEAVMDLIRAKTDKSMKVALNQLDGDLSRLIKALRQDILDVLAQVEVNI
DYPEYDAVEEMTTKMLKEKASEVRQRLETLLQTAKEGKVLRDGLATAIIGRPNVGKSSLL
NALLHEDKAIVTEVAGTTRDVIEEYVNVAGVPLKLIDTAGIRHTDDTVEKIGVERSKQAI
ETADLILLLIDSSRPLTEEDRALIEATAQKPRMVIFNKTDLPAQVDLAELTELVNGDPVI
QTSILEHAGMQELGQAIAHRFFNEGIESNRGAVMVTNARHIGLLHQAVDSLNAVLEGIEA
GMPVDLVQIDMTDAWNTLGEITGQTYQDELLDQLFSQFCLGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcagagcaagacacaattgcggcaatctcgaccccggttggggaagggggg
atctcaatcatccgggtgtccggcgaccaggccctagacgtggtgagccggatttttaag
ggcaaggatcttcaccaagttaaaagccacaccattaactacgggcacatcatcgatccc
gcaagcggggaaacggtagatgaggtaatggtttcggtgatgttagcccccaagacctac
accaaagaagacgtggtggaaatcaactgccatggggggctgttggcgactaaccgggcc
ctacaattaaccttaaccaacggggcgcggttggccgaacccggtgagtacaccaagcgg
gcctttttaaacggccgtttagacctctcccaggccgaagcggtgatggatctgatccgg
gccaagactgacaagtcgatgaaggtggccctaaaccaactcgacggagacctgtcgcgg
ttgattaaggccctacgccaagatatcctggacgttttggcccaggtagaggtcaacatc
gactaccccgaatacgacgcggtcgaagagatgaccactaagatgctaaaggaaaaggcc
agcgaggttcgccaacgcttggaaaccctcttgcaaacggccaaggaaggcaaggtctta
cgcgacggcctggccaccgccatcattgggcgaccgaacgtcggcaagtcgagcctttta
aacgccctcttgcacgaggataaggcgatcgtgaccgaagtagcggggacgacccgtgac
gtgattgaagaatacgtcaacgtggctggggtaccactgaagctaattgacacggcaggg
atccgtcacaccgacgacacggtcgaaaaaatcggggttgagcgctccaagcaagcgatt
gaaaccgccgacctgatcctcttgttgatcgactccagccgcccgctgaccgaagaggac
cgggcgctaattgaggccaccgcacaaaaaccccggatggtgatctttaacaagaccgac
ctgccggcccaagttgacctggctgagctaaccgaactcgttaacggtgacccagtcatt
cagacctccatcttggaacacgccgggatgcaggaactgggtcaagcaatcgcccaccgc
ttctttaacgaggggattgaatctaatcggggcgccgtgatggtcactaacgcccgccac
atcggcctgttgcaccaggcagttgactcgctcaacgccgttttggaggggatcgaggcc
ggaatgccggttgacctggtgcaaattgatatgaccgacgcttggaacacgctgggggaa
attaccggccagacctaccaagacgagttgcttgaccagctctttagccaattctgttta
ggaaagtag
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