Limosilactobacillus fermentum F-6: LBFF_0065
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Entry
LBFF_0065 CDS
T02669
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_0065
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBFF_0065
Archaeal homologous recombinant proteins
LBFF_0065
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
CTNNBL
Motif
Other DBs
NCBI-ProteinID:
AGL87987
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All DBs
Position
78145..79278
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AA seq
377 aa
AA seq
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MRFLHTADWHVGKKLNGFDLLAEQHDAFLKINQLAKDYKVDAVVVAGDLYDRSVPSEEAV
EELNKDLIQMNLKEGWPLLTVSGNHDSAVRLATGGAWFKATNFFMHTTVAQAIEEPVTLG
DTQFFLLPFFGLQEVRNYFGDPEIRDLKTAMARIVTKMEEEFDPDRAHVLVAHFFAAGSS
HTDSETQTEVGGLDAVPVDLMAPFDYVALGHLHNKNALQAPRVKYAGSPLKFSASEVNLD
KGVWIVDTQPFNLQWVPLEPLHDLVKLTGSFDELATVEYASHYQEDDFFVIELTDTAPIP
DLMNKLRHYYPKIIALSRVNKAADQSDLAAPAQDLENKDPLALLSDFYHQVTGEELSDNQ
RQWAKDALLAAQKEEEG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttctacacactgccgattggcacgttggtaaaaagttgaatgggttcgattta
ctggccgaacagcacgacgccttcttaaaaattaatcaattagcaaaggattataaagtt
gatgccgtggtggtcgccggggacctttacgaccgctcagttccaagcgaagaggcggtc
gaagagttaaacaaagacttaattcaaatgaatcttaaggaaggttggccactcttgacg
gtctcgggcaaccacgattcggcggtccgtttagccaccgggggggcctggtttaaggcg
accaacttctttatgcacaccacggtcgcccaggccatcgaagagccggtcaccctgggc
gacacccagttcttcttgctgcccttttttggcctccaggaggtacgtaattactttggt
gacccggagatcagggatttgaaaacggcaatggcccggatcgtgactaagatggaagaa
gaatttgacccggaccgcgcccacgtcttggtggcccacttctttgcggccggatccagc
cacaccgattcggaaacccaaaccgaggtggggggcctcgatgcggtaccggttgacctg
atggcaccctttgattacgtggcgttgggccacttgcacaataaaaacgcccttcaagca
ccgcgggttaagtacgccggatcaccgctcaagttttcggcgagcgaggtcaacctcgat
aagggcgtctggatcgttgacacccagccctttaaccttcagtgggtccccttagagccg
ctccacgacctagtgaagctaaccggctcctttgacgaactggcaacggtggagtacgcc
agccactaccaggaggacgacttttttgtaattgagttgaccgatacggcgccgatccca
gatttgatgaacaagctgcgccactactaccctaaaatcattgcccttagccgggtgaac
aaggccgctgaccagagtgatctagcggcgcccgcgcaggacttggaaaacaaggatccg
ctggccctgttgagtgacttttaccaccaggtgaccggcgaagagttaagcgataaccag
cgccagtgggctaaagacgccctgctagcagcccaaaaggaggaggaaggatga
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