Limosilactobacillus fermentum F-6: LBFF_0109
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Entry
LBFF_0109 CDS
T02669
Name
(GenBank) Serine family D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff00550
Peptidoglycan biosynthesis
lff01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LBFF_0109
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lff01002
]
LBFF_0109
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lff01011
]
LBFF_0109
Enzymes [BR:
lff01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LBFF_0109
Peptidases and inhibitors [BR:
lff01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LBFF_0109
Peptidoglycan biosynthesis and degradation proteins [BR:
lff01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LBFF_0109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Beta-lactamase
PBP5_C
Motif
Other DBs
NCBI-ProteinID:
AGL88031
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Position
125835..127130
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AA seq
431 aa
AA seq
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MNKQVKRWLYRTGVFLASLTMTAGSLTAVPAAVHADTTTSSTSSSSSTNSTTDYTVNAKA
AIAIDATTGQVLYAKNANTKLAIASISKIITVGVIEQEIKAGKLSWNTKVKVTKEEAKLS
ENTEYSNITLTAGKSYTVKELTEAAMIKSADAAAITLSRATGDSTASFVKKMQAFVKKAG
VTDAKLYNQVGLTNSQMGSYGLKGVAKNAENEMTATDVAKIAQYLIKNYPSLLNITKLTS
TTIDGTTVTTINKMLPGQSDAPTQVKIDGLKTGTSDKAGACFVSTGTYQGHRIITVVLHA
TGGGDERFTQTANLYRLIANEYTAYTVQPSVAVTVPNGKVTTTTLTTQGKITLWKKDGTL
LSPSLAINSKAADKNGKLTAPVKKGQVVGELTYAGLTGLDGNKLTVDVVPTTNVDKANVF
VRMGRWVKSHI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaagttaaacgatggttgtaccgcaccggggtcttcttggccagtttaacc
atgacggccggcagcctgacggcggttccagcggcggtccacgctgataccacgaccagt
tcgactagttccagctcatccacgaattcgacgaccgactacacggtcaacgccaaggcg
gcaatcgccattgacgccacgaccggccaggtcctctacgccaaaaacgccaacaccaag
ctggcgatcgcttcgatctctaagatcattacggtaggggtgattgaacaagaaatcaag
gcgggaaagctatcttggaacaccaaggttaaggtcactaaagaagaggccaagttatcg
gaaaacaccgagtactccaatatcaccctaacggcgggtaagagttacacggtcaaggag
ttgaccgaagcggcgatgatcaagtcggccgatgccgccgccatcaccctgtcgcgggcg
actggcgattccacggcaagcttcgtcaagaagatgcaagccttcgtcaaaaaggccggg
gtcaccgacgccaagctgtacaaccaagtcgggttgaccaacagccaaatggggagctac
ggcctcaagggggtcgccaaaaacgccgaaaacgaaatgacggcaaccgacgtggccaag
atcgcccagtacttgatcaagaactacccgagcctgttaaacatcaccaagttgacttcg
accacgattgatggcaccaccgttaccaccatcaataagatgctacccgggcaaagcgac
gccccaacccaggttaagatcgacggcttaaagaccgggacttcggacaaggcgggcgcc
tgctttgtttccaccgggacctaccaggggcaccggatcatcaccgtggtcctccacgcc
actggtgggggtgatgaacggttcacccaaaccgccaacctctaccgcttaatcgccaac
gaatacacggcctacacggttcaaccaagcgtggccgtaacggtgccgaacgggaaggtc
accaccacgaccttgaccactcagggcaagatcaccctctggaagaaggacggcaccctg
ctgtcgccgagcctagccatcaacagcaaggccgccgacaagaacggtaagctgaccgcc
ccggttaaaaagggccaggtggttggtgagctgacttacgccggtttgaccggtttggac
ggcaataagctgaccgtcgacgtggtaccaaccaccaacgttgacaaggccaacgtcttc
gtgcgcatgggccgctgggtaaagagccatatctaa
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