Limosilactobacillus fermentum F-6: LBFF_0217
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Entry
LBFF_0217 CDS
T02669
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBFF_0217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lff03021
]
LBFF_0217
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_0217
Transcription machinery [BR:
lff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBFF_0217
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBFF_0217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Glypican
Motif
Other DBs
NCBI-ProteinID:
AGL88133
LinkDB
All DBs
Position
242164..242751
Genome browser
AA seq
195 aa
AA seq
DB search
MDLKVFDGQEKSELSMIEVAHAILAYHNEAMAFADLTNEIQQYLGKSDEEIRERLSQFYT
DLNVDGSFISLGDNTWGLRAWYPYESIDEATVGETEDEEDRPKKRRRKVNAFLAGTDDDD
DVIDYDNDDPEDEDLDDDQGPDDDDDYEEDDYDEDNPVEDDDEETNIEDQLSELHGDEFG
DDEEEDEEDKEDDEE
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttggatttaaaggttttcgatggccaggaaaaatcagaactttcaatgatcgaagtggct
cacgcaatcttagcttaccataatgaggcaatggcgtttgccgacttgaccaacgagatt
caacaataccttggtaaaagtgacgaggaaattcgggaacgactctcgcagttttacacg
gacctgaacgtcgatggcagctttatttcccttggtgataacacctggggcctgcgtgcc
tggtacccgtacgaatcgatcgatgaagcaacggttggtgaaaccgaagacgaagaagat
cggccaaagaagcgccggcgcaaggtcaatgccttcttggcaggaactgacgacgacgac
gatgtgatcgactacgacaacgatgatccagaagatgaagatctggatgatgatcaaggt
ccagacgatgacgacgattacgaagaagacgactacgatgaggataaccccgttgaagat
gatgacgaggaaaccaacatcgaagatcaactgtctgagcttcacggcgacgaattcggc
gacgatgaagaagaggacgaagaagataaagaagacgacgaggaataa
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