Limosilactobacillus fermentum F-6: LBFF_0265
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Entry
LBFF_0265 CDS
T02669
Name
(GenBank) S1 domain RNA-binding protein
KO
K06959
protein Tex
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LBFF_0265
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
HHH_9
Tex_N
S1
YqgF
HHH_7
S1_RRP5
T2SSK
TOBE_2
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AGL88178
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Position
298147..300324
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AA seq
725 aa
AA seq
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METEVLTRVQAKLTQFKGAQVRVALDLLNDGNTIPFVARYRKEATGALDEVALQTIQEQA
KKEQELFDRKNAVIKLIEAAGKLTAPLQEKIQGADDLATVEDLYLPYKQKRRTKAQVAKE
NGLMPLANWLLKYETADPKTEAAHYVNQEVPDAEAALAGAHEILAEGIAEMATVRSWLRN
YTTEHGRLEVAVKKDGEQLDERGVYEQYYDFSEQVSQLSSYQILAINRGEKEKILRVKVV
ADPTTVTNYLNFRLVRGHQPNAATELVEAAAKDAYKRFLGPAIEREVRTKLTEGASARAI
KVFGQNLYHLLMQAPLKGRVVLGFDPAYRTGCKLAVLDPHGKVEQIAVIYPHKPAPEAKR
AQAEAEFLDLVERYQVSTVAIGNGTASRESEQFVATALQKLSRPVYYVIVNEAGASVYSA
SPAAREEFPDLTVEKRSAISIGRRLQDPLAELVKIDPQAIGVGQYQHDLPEKELASELDA
VVERAVNRVGVNLNTASYQLLTRISGLTKTIAQNIVAYRNDNGAYTNRNQLKKVPRLGPK
AFQQAVGFLRIVGGQNPLDNTDVHPESYPVAKSILAAADVTVNELGTEQANARLAKLQPA
DFVSETVGLATVKDVLEALQKPGRDLRDGMPAPLLRQDVMTMDDLKPGMQLEGTVRNVVD
FGAFVDIGVKHDGLVHLSRMAKKYPKDPHSLLAVGDIVTVWVHAVDKQRDRIQLTMLPPK
KGDND
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggaaacagaagtactaacccgggtgcaggctaagctcacccaattcaagggcgcccaa
gtgcgggtggcccttgatttattaaacgatggcaacacgatcccctttgtcgctcggtac
cgcaaggaggcgacgggggcgttagacgaagtggccctacaaacgattcaagaacaggct
aaaaaagagcaggaactctttgaccgcaaaaacgccgtgattaagttgatcgaggcggcg
gggaagttaacggcaccgctacaagaaaaaattcagggcgccgatgacttagccaccgtt
gaagacctgtacttaccgtacaagcaaaaacggcggaccaaggcccaagtggctaaggaa
aacggtttgatgccgttagctaactggctgctcaagtatgagactgcggacccgaaaaca
gaagcggcgcactacgttaatcaagaggtgccagacgctgaggcggccctggccggcgcg
cacgaaattctcgccgaggggattgccgaaatggcgacggtgcgcagctggttgcgtaat
tacaccactgagcacggccggttagaagtcgccgtcaaaaaggacggggagcaacttgat
gagcgaggcgtttacgagcagtactatgactttagcgagcaggttagccagcttagctcc
taccagatcctagcgatcaaccggggggaaaaggagaaaatcctgcgggttaaggtggtg
gccgacccaaccacggtaaccaactacctgaacttccgcctggtacgtggccaccagcca
aacgccgcgaccgagttggtggaagcggcggccaaagacgcctacaagcgctttttggga
ccggcgattgagcgggaggtgcgcactaagttaaccgaaggggccagcgcccgggcaatc
aaggtctttgggcaaaacctctaccaccttttgatgcaagcgccgttaaagggccgggtg
gtgttaggttttgaccccgcctaccggaccgggtgcaagttggcggtgttagatccccac
gggaaggtggaacaaattgccgtcatctacccccacaaacccgccccggaagctaagcgg
gcccaggccgaagcggagtttttggacctggtggaacgctaccaggtttcgacggtcgca
atcgggaacgggacggccagccgtgaatccgagcagtttgtggctacggccctgcaaaag
cttagccggccagtctactacgtaattgtcaatgaagccggggcgtcggtctactcggcc
tcgccagccgccagagaagaattcccggacctgacggtggaaaagcggagcgccatttca
attgggcgccgcctccaggatccgttggcggaactggttaagattgatccgcaagccatt
ggggtcggccagtaccaacacgacctcccggaaaaggagttagcgagtgagctcgacgcc
gttgttgaacgggccgttaaccgggtgggggttaatttgaacaccgcttcctaccagcta
ctaacccggatttcggggttgaccaagacgattgcccaaaacatcgttgcttaccgcaat
gataacggcgcctacacgaaccggaatcagttaaaaaaggttccccgcctcgggcccaag
gcctttcaacaagcggtcggctttttacggatcgtcggtgggcaaaacccgctcgataac
accgatgtccacccggaaagctacccggtggccaagtcaattttggcggcggccgacgta
acggtgaacgagctgggcaccgagcaggccaacgcccggctggctaagcttcagccagcg
gacttcgtgtccgaaacggtcggcttagcaacggtaaaagacgtgctagaggccctgcaa
aagccggggcgggacctacgcgacgggatgccggcgccgttactgcgtcaggacgtaatg
acgatggatgacttaaagcccggcatgcaactagagggaacggtgcgcaacgtcgtcgac
ttcggtgcctttgttgacatcggggttaaacacgatggcttagtccacctatcgcggatg
gctaagaagtacccgaaggatccgcacagcctattggcggttggcgacatcgtcaccgtt
tgggtgcacgccgttgataaacagcgtgaccggattcagttgaccatgttgccaccaaag
aagggtgacaatgactaa
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