Limosilactobacillus fermentum F-6: LBFF_0380
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Entry
LBFF_0380 CDS
T02669
Name
(GenBank) ATP-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lff03019
]
LBFF_0380
Messenger RNA biogenesis [BR:
lff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LBFF_0380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_16
nSTAND3
AAA_22
CoaE
AAA_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AGL88293
LinkDB
All DBs
Position
420164..421033
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AA seq
289 aa
AA seq
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MAEQLEVVIITGMSGAGKTVAVQSFEDLGYFVIDNMIPSVATKFVDAVKQSGEITRMAMV
MDSRSRGFYDQVVPCVAQLRGRSDLTLRLLFLEATDEELVSRYKESRRAHPLSHQDGVLP
GIMRERQLLNDLKSQADLVVDTTTLTPRQLKQRITERFSPDEAHSFYVNVMSFGFKYGLP
LDADLVIDVRFLPNPYYIPDLKHQTGNDPAVQAYVMDNPLAQNFYQHLYSLIEVALPGYI
KEGKSSLTIAIGCTGGQHRSVTIANRLAADLKNNQYPVHVHHRDVDKAN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaattagaagtggtcatcatcacgggaatgagcggggccggaaagacggtg
gccgtccaatcctttgaagacttgggctactttgtcattgacaacatgattcctagcgtg
gccaccaagttcgttgacgcggttaagcagtccggtgaaattacccggatggcaatggtg
atggactcccggtcacggggattttacgatcaggtggtgccgtgcgtagcgcaactacgg
gggcgttctgatcttacgctacggctcttatttttggaggctacggacgaggagctagtt
tcgcgttataaagaatcgcgccgggcccaccccttgagtcaccaagatggtgttttacca
ggcatcatgcgggagcgccagctgttaaacgacctgaagtcgcaagcggatctggtggtt
gatacgaccaccctgacgccccgccagcttaagcaacgaattacggaacgtttttcaccg
gacgaggcccactcgttttacgttaacgtgatgtcctttggctttaagtacgggcttccc
ctggacgctgacttggtgattgacgtccggtttttacctaacccgtattacattccagac
ctaaagcaccagacggggaacgatccggcggtccaagcttacgtaatggataatccgctg
gcccaaaacttctaccaacacttgtattcgctaattgaagtcgccttgccgggatacatc
aaggagggcaagagtagtttgacaattgccattggatgtacggggggccaacaccggtca
gtaacgattgctaaccggctggccgctgacctgaagaataaccaatacccagttcacgtc
catcaccgtgatgtggacaaggccaactaa
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