Limosilactobacillus fermentum F-6: LBFF_0416
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Entry
LBFF_0416 CDS
T02669
Name
(GenBank) DNA-directed DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff03030
DNA replication
lff03430
Mismatch repair
lff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBFF_0416
03430 Mismatch repair
LBFF_0416
03440 Homologous recombination
LBFF_0416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lff03032
]
LBFF_0416
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_0416
Enzymes [BR:
lff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBFF_0416
DNA replication proteins [BR:
lff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBFF_0416
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBFF_0416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
DUF2779
Motif
Other DBs
NCBI-ProteinID:
AGL88327
LinkDB
All DBs
Position
complement(468786..469325)
Genome browser
AA seq
179 aa
AA seq
DB search
MNFIAMDFETASAKRFSACSLAITIVRNSQIQDEFYTLINPQTPFFWRNTQVHGIHERDV
KDAPTFPEVWEHIQEFFTPDKLVIAHNATFDNSVLKNTLLHFEIEPPVYQTLDTLKTSRQ
LFPAFPNHKLNTICDQLNIDLHHHHNALDDAHACANILLYQANHFGTVPLRPFVRVVNR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgaactttatcgccatggactttgaaacggctagtgcgaaacgtttttcggcttgttca
ctggctatcaccatcgttcgtaacagtcagatccaagatgagttttataccttaattaac
ccgcaaacgccctttttttggcgtaacacccaggttcacgggatccacgagcgcgatgta
aaagacgcccctacctttccggaggtgtgggagcacatccaagaattcttcacgcccgat
aagctcgtgattgcccacaacgccacctttgacaacagcgttttgaaaaataccctgctc
cactttgaaattgagcccccggtctaccagacgctagacaccttaaagaccagccgccag
ctgttcccggcgtttcccaaccacaagctcaatacaatctgtgaccagctcaatatcgac
ctacatcaccaccataatgccttagacgacgcccacgcctgcgccaacatccttttgtac
caggctaatcactttggtacggtgccacttagacccttcgttcgggtggtcaaccgctaa
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