Limosilactobacillus fermentum F-6: LBFF_0531
Help
Entry
LBFF_0531 CDS
T02669
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBFF_0531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_0531
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBFF_0531
RecFOR pathway proteins
LBFF_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
IMS_HHH
UBA_6
Orbi_NS1
DUF2642
Motif
Other DBs
NCBI-ProteinID:
AGL88440
LinkDB
All DBs
Position
589113..589715
Genome browser
AA seq
200 aa
AA seq
DB search
MFEYLTGLITMVSPDFIVVDVNGVGYRVAVANPYAYQEDDQQAVQVFIYQAVKEDAITLF
GFATQAEKRLFTQLIGVSGIGPKSALAILATPDHQGLIDAIQNGDDKYLSKFPGIGKKTA
SRIIIELKDKVVAVQDEVQLDFTAPGPLGPSAALQDALAALESLGYTTKQVERVQKQLEG
LQGELSTNDYLSQGLKLLSR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatatttaaccggtttaattacaatggtcagccccgattttatcgtggttgac
gtcaacggggtcggctaccgggtggcggtggccaacccctacgcctaccaagaagacgat
caacaggccgtccaggtctttatttaccaagcggtcaaagaagacgccattaccctcttt
gggttcgcaacccaggccgaaaagcgcctgttcacccagctaattggggtctccgggatt
gggccgaagagtgccctggcaatcttagccactcccgaccaccaggggctaatcgacgcg
attcaaaacggcgacgataagtacctgagcaagttcccggggattggtaagaagacggcc
tcgcggatcattattgagttaaaggacaaggtcgtggcggttcaagacgaggtccaactc
gacttcacggccccagggccactgggtccgtccgcggcactccaagacgccttggcagcc
ctggagtcgctagggtacacgaccaagcaagtcgaacgggttcaaaagcaattggaaggc
ttgcaaggcgagctgtccaccaacgactacctcagccagggcctgaagttgttgagcaga
taa
DBGET
integrated database retrieval system
