Limosilactobacillus fermentum F-6: LBFF_0535
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Entry
LBFF_0535 CDS
T02669
Name
(GenBank) Phosphoesterase, RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff00920
Sulfur metabolism
lff01100
Metabolic pathways
lff01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
LBFF_0535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_0535
Enzymes [BR:
lff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
LBFF_0535
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
LBFF_0535
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
LBFF_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGL88444
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All DBs
Position
592320..593354
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AA seq
344 aa
AA seq
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MSFWFAVKNWYTKNRLPQADERKITMADLDAIFEQIKKYNRIIIHRHQRPDPDAIGSQVG
LASILRASFPYKEVAVVGKEIPGFNWIGQMDDVDSSEYDGALVIVTDTANAPRIDDRRFN
NGDELIKIDHHPNDEPYGDLMWVDDQASSCSELIYGFYQHFAKELTMTKEAATALYAGII
GDTGRFLYPATTPKTMLVAGALMAAGADAAAISQRENEISLPLARLSAYVYEHLTITDSG
AGSVLLTDEVLNQFGLTEAGTSAVVSLPGRIKDVVAWAIYVQQEDGGFRVRLRSKGPVIN
ELAKRHHGGGHPLASGARANDEAEMKQIMQELDELTTQFLKGEL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttttggttcgccgtcaaaaactggtatactaagaaccggttaccccaagcggac
gaaaggaagattacgatggcagacttagatgcgatctttgaacaaattaaaaagtacaac
cggatcattatccaccggcaccaacgcccggatccagatgcgattggttcacaggtgggc
ctagcgtcgattttacgggcgtcttttccctacaaggaagtggcagtcgtgggtaaggaa
atccccggttttaactggatcggccagatggacgacgtcgacagtagcgaatacgatggc
gccctggtgattgttaccgacacggccaacgccccgcggattgacgaccggcgctttaat
aacggcgatgagttgattaaaattgatcaccaccctaacgacgagccctacggtgacctc
atgtgggtcgatgaccaggcgagttcttgttccgagctgatttacggtttttaccaacac
tttgctaaggaactaacgatgaccaaggaggcggcaacggctctgtacgccgggatcatt
ggcgacacgggacgctttttgtacccggccacgacgcccaagacgatgctggtggccgga
gccttaatggccgccggcgcggatgccgccgccatttcccagcgcgaaaacgaaatttcg
ctccccctggcccggttgtccgcttacgtttacgaacacttaacgattaccgacagcggg
gcggggagcgtcttattaaccgatgaagtcctcaaccaatttgggctgactgaagccggc
acctcggccgtcgtttccctgccaggacggatcaaagacgtcgtggcctgggcaatctac
gtccaacaagaggatggcggtttccgggtgcgcctgcgctccaaggggccggtgattaat
gaattggccaagcgccaccacggagggggccacccgctcgcctccggggcccgggccaat
gacgaagcagaaatgaaacaaattatgcaggaactggatgagttaacgacccagtttcta
aaaggagaactttaa
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