Limosilactobacillus fermentum F-6: LBFF_0537
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Entry
LBFF_0537 CDS
T02669
Name
(GenBank) Alanyl-tRNA synthase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LBFF_0537
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lff01007
]
LBFF_0537
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lff03016
]
LBFF_0537
Enzymes [BR:
lff01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
LBFF_0537
Amino acid related enzymes [BR:
lff01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LBFF_0537
Transfer RNA biogenesis [BR:
lff03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LBFF_0537
Prokaryotic type
LBFF_0537
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
LBP_M
DUF3659
DUF4411
Motif
Other DBs
NCBI-ProteinID:
AGL88446
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Position
594989..597637
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AA seq
882 aa
AA seq
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MKELKKLNSAQIRRMYLDFFVQHGHTEMPSRSLVPVNDPTLLWINSGVATMKNYFDGKVV
PDNPRMTSSQKSIRTNDIENVGKTARHHTMFEMMGNFSVGDYFKKEAITWAWELLTSDEW
FGFDPERLYITYYPKDNDAHQFWLDAGVKEDHLLADQDNFWDIGQGPSGPDTEVFYDRGQ
EMNNLPEDDPESYPGGENERYLEIWNIVFSQFNHTPEDTYEPLPNKNIDTGMGLERVVSI
FENAKTNFETDLFMPLIKQVEGFSADKQYGQNAADDVQFKIIADHIRSITFAIGDGALPS
NVGRGYVIRRLLRRSVVAGKKLGIDEPFLAKMVPTVGEIMKDYYPDVLENADYIASVISS
EEDRFSATLNGGLSLLNSVIDEAKQTDGKQIDGKTAFKLYDTYGFPVELTREYAADEGLT
VDEQGFEAAMTEQQNRARNARDMDNGMGVQSDLWTNFTDESKYVGYTDLVVDNAKVIGLA
ADGKQADQAEPGQHVDVIFDQTPFYAEMGGQVADTGQVIDNYGKVVATVKDVQHAPHQQN
LHTLELTAPIKKGARYKLVVDRARHLKIEKNHTATHLLDQALRNVLGGHTQQAGSLVEAH
YLRFDFNHFGQVTKEDLKKVEDMVNEQIWKEIPVTTVETDIDSAKKMGAIALFSDKYGDK
VRVVKIGDFNTEFCGGDHVKNTNEIGLFKIVSEGGVGAGVRRIEAVTSSDAFAFMQERVD
SLDHIAADLKVAQVKEVAHRVSELQDQLKEATKQNEALQAKLAAQQAGDVFNQAEETAKG
TLIAAEVKVAGMDQLRQMADDWRQKDYSDVLVLATAAGDKANLLVAVKDGLAKTVKAGDL
IKAIAPAINGGGGGRPTLAQAGGKNPAGISEALKLASQFMND
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactgaaaaaactgaactccgcccagattcggcggatgtacttagacttcttt
gttcaacacggacacaccgagatgccgtcacgctccctggtgccggttaacgacccgacc
ctgctctggatcaactccggggtggcaacaatgaagaactacttcgatggtaaggtggtt
ccggacaacccgcggatgacctcttcgcaaaagagtatccggaccaacgacattgaaaac
gtggggaaaacggcccgccaccacaccatgtttgaaatgatggggaacttctcggttggt
gactacttcaaaaaggaagccattacctgggcctgggaactgttaaccagtgacgaatgg
tttggctttgacccggaacgcctctacatcacttactacccgaaggataacgacgcccac
caattctggctggacgccggggtcaaagaagaccacctcttagccgaccaggataacttc
tgggacattggccaggggccgtccggtccggacacggaagttttttacgaccgcggccag
gaaatgaacaacttaccggaagacgatccggaatcctatccggggggcgaaaacgaacgc
tacctggaaatctggaacatcgtcttctcccagtttaaccacaccccagaagacacttac
gaaccgttaccgaacaagaacatcgataccgggatggggctggaacgggtcgtttcaatc
tttgaaaacgccaagaccaactttgaaaccgacctcttcatgccgctgatcaagcaggta
gaaggcttctctgccgacaagcagtatggccaaaacgccgccgatgacgttcagttcaag
atcatcgccgaccacatccgttcgatcacctttgcgattggcgacggggccctgccatcc
aacgtcgggcgtggctacgtgattcgccggctcttacggcgttcggtggtggccggcaag
aagttagggattgacgaaccgttcctagctaagatggtacccaccgttggcgaaatcatg
aaggactactacccagacgtcttagaaaacgccgactacatcgcctcagtgatctcctct
gaagaagaccgcttctccgccactttaaacggggggctgagcctgttaaacagcgtgatc
gatgaggctaagcaaactgatggcaagcaaatcgacgggaaaacggccttcaagctttac
gatacctacggcttcccggttgagctgacccgtgaatacgcagccgacgagggcttgacc
gttgacgaacagggctttgaagcggcgatgaccgaacagcaaaaccgcgcccgcaacgcc
cgtgacatggacaacgggatgggggtgcaaagcgacctgtggaccaacttcacggacgaa
agtaagtacgtgggctacaccgacctggtggttgataacgccaaggtaatcgggttggcc
gccgacggtaagcaagctgaccaagcggaaccgggtcaacacgtcgacgtcatcttcgac
cagaccccgttctacgccgaaatggggggccaagtagctgacaccggtcaggtcatcgat
aactacggcaaggtggttgccacggttaaagacgtccaacacgccccacaccaacaaaac
ctccacaccttagagttaaccgccccaattaagaagggcgcccgctacaagttagtggtg
gaccgggcccgccacctcaagattgaaaagaaccacaccgccacccacttgctggaccaa
gccttacgcaacgtcttgggcggccacacccaacaagccgggtccttagtggaggcccac
tacctacgctttgacttcaaccacttcggtcaggttactaaagaggaccttaagaaggtt
gaagacatggtcaacgaacagatctggaaggaaattccggtcacgacggtcgaaaccgac
attgattccgctaagaaaatgggggcaatcgccctcttctccgacaagtacggtgacaag
gtacgcgtcgttaagattggtgatttcaacaccgaattctgtggtggggaccacgtcaaa
aacaccaacgaaatcggcctcttcaagattgtttccgaaggtggggtcggcgccggggtc
cggcggatcgaagccgtgacgtccagtgacgcctttgccttcatgcaagagcgggtcgac
agcctagaccacatcgccgccgacctgaaggtggctcaagttaaggaagtcgcccaccgg
gttagtgagttgcaagaccagctcaaggaagccacgaagcaaaacgaggccctgcaagct
aagttagccgcccaacaagccggcgacgtcttcaaccaggcggaagaaacggcgaaggga
accttgattgccgccgaagttaaggtggccggaatggaccaactgcgtcaaatggctgac
gattggcgccaaaaggattactccgatgtcttggtcttagccacggccgctggtgacaag
gccaacctcttggtagcagtcaaggatggcctggccaagacggtcaaggctggtgacttg
atcaaggcaattgccccggccattaacgggggcgggggcggtcgcccaaccctggcccag
gccggcggaaagaacccagccgggattagcgaagctctcaagctggctagccaattcatg
aatgattaa
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