Limosilactobacillus fermentum F-6: LBFF_0581
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Entry
LBFF_0581 CDS
T02669
Name
(GenBank) Pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lff03009
]
LBFF_0581
Enzymes [BR:
lff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LBFF_0581
Ribosome biogenesis [BR:
lff03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LBFF_0581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AGL88487
LinkDB
All DBs
Position
640289..641179
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AA seq
296 aa
AA seq
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MEFKWHYLGEQPRRLRSVFRSFGVTNSLLKVAIFHGGQMRINDRVAWAIDQVEPGDVVYL
VVPNEPANPTITVSDQTFEIAYEDEDFLVINKEAGVATVPAHHVAVQDSLVNRVKGYYQR
QNYPNQVTHVATRLDKDTSGLVVFPKHRFAHAVLDRQLKARQVKKEYLAMVQGRLTVSHG
YIDAPIRRDPDSFVKRLVAPDGKASATEYWCERVTDTTSLVRVRLHTGRTHQIRVHFSFL
GHPLLGDDMYGTGFGMPRQALHCQRVSFYSPFKQKVISVTAPLPTDFQRAEDEWLN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaagtggcactacttgggcgagcaaccacgtcggttacggtcggtctttcgc
tcctttggggtgactaattcgctacttaaggtggccatcttccatggcggtcagatgagg
atcaatgatcgggtggcgtgggccattgaccaagttgagcccggcgacgtggtttattta
gtggttcctaatgagccggctaatcccaccatcacggtcagtgaccaaacctttgaaatc
gcttatgaggatgaagactttttggtgattaacaaggaggccggcgtggccaccgttcct
gcccatcacgtcgccgtccaagacagcctggtcaaccgggtcaaggggtattaccaacgg
caaaattaccccaatcaagtgacccacgtggcaacccgcttggataaggatacgtcgggg
ctagtggtttttccaaagcaccgcttcgcccacgcagtcttagaccgccaactgaaggcc
cgccaagtcaaaaaagagtacttggcaatggtgcaggggaggttaaccgtaagtcatggt
tacatcgacgccccgatccgccgggatccggactcctttgtgaaacggttggtggctccg
gatggcaaggcatcggcaaccgaatactggtgtgaacgggtgacagatacgactagtttg
gtacgagtccgcttacacacgggccggacccaccagattcgggtccacttttcctttttg
ggccatcccctattgggagacgatatgtacgggactggctttgggatgccccgtcaagcc
ttgcattgtcaacgggttagtttttactctccctttaagcagaaggtaatttccgtcacc
gccccactgcccacggactttcagcgggctgaggatgagtggttaaactaa
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