Limosilactobacillus fermentum F-6: LBFF_0650 Help Entry LBFF_0650         CDS       T02669                                  Name (GenBank) Recombination protein J   KO K07462   single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Organism lff  Limosilactobacillus fermentum F-6 Pathway lff03410   Base excision repair lff03430   Mismatch repair lff03440   Homologous recombination Brite KEGG Orthology (KO) [BR:lff00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     LBFF_0650    03430 Mismatch repair     LBFF_0650    03440 Homologous recombination     LBFF_0650  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lff03400]     LBFF_0650 DNA repair and recombination proteins [BR:lff03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     RecJ      LBFF_0650   DSBR (double strand breaks repair)    HR (homologous recombination)     RecFOR pathway proteins      LBFF_0650    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       LBFF_0650 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ssDNA-exonuc_C DHH RecJ_OB DHHA1 DUF4254 Motif Other DBs NCBI-ProteinID:  AGL88556 LinkDB All DBs Position 710283..712580 Genome browser AA seq 765 aa AA seqDB search MIDSKYAWQGQANGDKETIQVVADATGLPAELAALLVNQGIKSADAAQRWLNPQAEDLHT PDALHDVDRAVERIMAAVEAGEKITVYGDYDADGITATTLMYEALETLGAQVDYYVPDRF TDGYGPNQAVYQRLIEGGTQLIVTVDNGVAGLAAIEYAKEQGVDVVITDHHALPEQLPPA VAIVHPQYPGSEYPFADLSGVGVAFEVAWALLGEFPVEMLDLVAIGELADLVSLAGENHA LVALGLQQLRQGSRPGLHALLKLAGVKEATLTGTDVGFQLAPRLNALGRIEQAGPGVVLL STFDEEEAERLAKEVDQTNEERKQLVEQITKEALAMAANQQVPALVLVGHGWHQGVLGIV AAHVVQATGKPTIVASANEGETIAKGSGRSVEGLDLFAALDQHRDLMTAFGGHAMACGMS FELTAAAPLQAALNEEVTAQGFNQQQKPPLKITLTLAPDRLTQDLYTQIQRLAPFGPGNE EPQIELDVKGPVATQVMGKDKSHLKLKVGQPPLDVVAFGKASLAPALAEAEEVKLVGTLS LNEWRGKTSCQLMLTDVAATGVTVLDQRTARLLPPMFEPAAVYLAFDERLRNNINGHANG PVVGPKDLTADLVANQELVVVDCPPIISQLTTSLAKCAAASSIRLLCYFNQAPLTGMPAY QAFAKLYRLLGQNPNININQQVNPISNYLRLPADQLIFMINVFFEAGFVTIKDGVLNLVP QAQRRDLKETTSYRRRQAQLEVERALVHSSHPDLVAWVKRLVGAR NT seq 2298 nt NT seq  +upstreamnt  +downstreamnt atgattgacagcaagtacgcctggcaagggcaagcaaacggcgataaagaaacgatccag gtggtggccgatgcgacggggctaccggcggagttagcggcccttttagtcaaccagggg attaaaagcgctgacgccgcccaacggtggctcaacccgcaagcagaagacctccacacc cccgacgcgttgcacgacgtcgaccgggccgttgagcggatcatggcggcggtcgaagcg ggcgaaaagatcacggtctacggcgattacgacgccgacgggatcaccgctactactttg atgtacgaggcactggaaacgctgggggcgcaagttgattattacgtgcccgatcgtttc actgatggttacgggcccaatcaagcggtctaccagcggctgattgaggggggcacccag ctaatcgtcaccgttgacaacggggtggccgggctggcggcgattgagtatgccaaggag cagggggttgacgtggtcattaccgaccaccacgccctgcccgaacaactcccgccggcc gtggcgattgtccacccccagtacccgggtagcgagtatccctttgccgatctgtccggg gtcggggtcgcctttgaagtggcctgggccctgctgggtgagttcccggtggaaatgctg gacctggtggcgatcggggagttggccgacctggtttccctggccggtgaaaatcacgcc ctagtggcactggggttgcagcagctccgccaggggagccggccgggcttgcacgccctg ctgaagttagccggggtcaaggaggcgaccctgaccgggaccgacgtgggcttccaacta gcgccgcgcttaaacgccctcggccggattgaacaggccggcccgggggtggtcctcttg tccacctttgacgaagaggaggccgaacggttagctaaagaagtcgatcaaaccaacgag gagcgtaagcaactggtggagcagatcactaaagaagccctcgcaatggcggctaaccaa caggtgcccgccctggtcttggtgggccacggctggcaccagggggtgttagggatcgtg gcggcccacgtggttcaagcaaccggtaagccaaccatcgtcgcttccgccaacgagggt gagacgatcgcgaagggctccggccgctcggtggagggcctcgatttgttcgccgccctg gatcagcaccgcgacttgatgacggccttcgggggtcacgcaatggcctgcgggatgtcc tttgaattaactgcggcggcgcccctacaagcggccttaaacgaagaggtcacggcgcag ggctttaaccagcagcaaaaaccgccgttaaaaattaccctgaccttggcaccagaccgg ctcacccaggacctgtacacgcaaatccagcggttggcgccctttggcccgggcaacgag gagccccaaatcgaactcgacgtcaagggaccggtggcgacccaggtgatgggcaaggac aagtcccaccttaaactaaaggtcggtcaaccgccgttagacgtggtcgcctttggcaag gctagcctagcaccggccctggccgaggcggaagaagtcaaactggtcggcaccctcagc ttaaacgagtggcggggcaagaccagctgccagctgatgctaaccgacgtggcggccacc ggagtcaccgtgctcgaccaacggacggcccggctgttgccgccgatgtttgaaccggct gcggtttacctggccttcgatgagcggctgcgcaataacattaatggccacgctaacggg ccggtggtcggccctaaggacctcaccgccgacctggtagctaaccaggaactggtagtg gttgattgcccgccgatcattagccagctgaccacaagcttggctaagtgcgcggcggct agttcgatccgactcctgtgctacttcaaccaggcccccctgaccgggatgccagcctac caggcctttgccaaactgtaccgcctgctaggccaaaaccccaacataaacatcaaccag caggtcaacccaattagtaactacctgcgcttgccagcggatcagttaattttcatgata aatgtgttttttgaggctggatttgttacaataaaagatggtgttttaaatctcgtcccg caggctcagcggcgggaccttaaagaaacaacgagttatcgtcgccgccaggcgcaatta gaagttgaacgggccctggtccattcgtctcaccccgatctagtggcgtgggtcaagcgg ctggttggcgcgcgctaa

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