Limosilactobacillus fermentum F-6: LBFF_0744
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Entry
LBFF_0744 CDS
T02669
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lff03016
]
LBFF_0744
Enzymes [BR:
lff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LBFF_0744
Transfer RNA biogenesis [BR:
lff03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBFF_0744
Prokaryotic type
LBFF_0744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGL88650
LinkDB
All DBs
Position
800507..801403
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AA seq
298 aa
AA seq
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MDGIIPLYKERGMTSFDCIARLRRILHTKKVGHSGTLDPNVDGVLPIAIGNATKAVEYLM
ASGKEYAGELTIGLATTTEDLDGEVVDQKPVPVPIAREMIAEKMAEMTGEITQVPPMYSA
VKVKGKRLYEYARAGETVERPKRQVTIDRFTLLATSYDQERQVQRVRFKVACSKGTYVRT
LAVDLAAKLGYPGVMSSLTRLKSGGFTLDQTLSLDDIQDMVTASGMVNLYPLDYAVKDLP
HLALNAEQWQAVQNGGWLKQSEVTPQEPRVVVTYQGDTKAVYKHVERHYQPEKMFKNS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacggaatcattccactttataaggagcgggggatgacctcgtttgattgcatcgcc
cgcttgcggcggattttacacaccaagaaggtcggccactcggggaccctggatcccaac
gtggacggggtcttaccaattgcgatcggcaacgccaccaaggccgtggaatacctgatg
gcctcgggtaaggagtacgccggcgaattgacgattgggctagcgacgaccaccgaagac
ctcgatggggaagtggtcgaccaaaagccggtgccggtgcccatcgctcgagaaatgatt
gcggaaaaaatggccgaaatgaccggggaaatcacccaggtgccgccgatgtattcggcc
gtgaaggtcaaggggaagcgcttatacgagtacgcccgggctggtgaaaccgtggaacgc
cctaagcgccaagtgacgatcgaccggttcaccctgctagccaccagttacgaccaggaa
cggcaagtccagcgggtccgctttaaggtagcctgctccaaggggacgtatgtgcggacc
ctggccgtcgacctggccgccaagttgggctacccgggggtgatgtcgtctttgacccgg
ttaaagtcgggtggcttcaccttggatcagaccctgagccttgatgacatccaagacatg
gtcacggcgagcgggatggtcaacttgtacccgcttgattacgccgtcaaggacctgccc
cacctggcactcaacgccgagcagtggcaagccgttcaaaacggtggctggctcaagcaa
agcgaggtaaccccccaagagccgcgggtggtggtcacctaccaaggggacaccaaggcc
gtttataagcacgttgagcgccactaccaacccgaaaagatgtttaagaatagttag
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