Limosilactobacillus fermentum F-6: LBFF_0852
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Entry
LBFF_0852 CDS
T02669
Name
(GenBank) (P)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff00230
Purine metabolism
lff01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LBFF_0852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lff03009
]
LBFF_0852
Enzymes [BR:
lff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
LBFF_0852
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
LBFF_0852
Ribosome biogenesis [BR:
lff03009
]
Prokaryotic type
Other maturation factors
LBFF_0852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
tRNA_synt_1c_R1
ThiS
Motif
Other DBs
NCBI-ProteinID:
AGL88746
LinkDB
All DBs
Position
896038..898272
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AA seq
744 aa
AA seq
DB search
MSQTKELTHEDVKNMVAKYMNEEHVALVERAYHFAAVAHQGQVRKSGEPYIIHPIQVAGI
LAELKMDPETVCAGYMHDLVEDTGATLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQM
AETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGI
STIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKTAIADLDLGPNVEI
YGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVVDSIKDCYAVLGAIHTSWTPMPGRFKD
YIAMPKANGYQSLHTTVIGPEGRPLEIQIRTHQMHEVAEYGVAAHWAYKEGKTNGVDQAS
QDSKKLNVVKEILELRSESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMA
YQIHTEVGNHTTGAKVNGRIIPLNYEIKNGDIVDILTSSSSAGPSRDWMDLVSTRRARNK
IRQFFRTHDREENVIEGRRIMEQQLRDAGYEPAELMVSDKEEEIAGKLHYKTADDMYAAL
GFGDIAPIGLRNRFTEDIRKHKEEEKQNAAQKAILEGHKTLEQEPPTRQKVAKSSEGVVV
EGVDNLLTRLSHCCSPVPGDAIVGYITKGRGVSVHRADCPNIKAAEKSGQRVVSVYWANP
AGDKTNYNADIEVEGYNRNGLLNDIIRAINNNTRYLTSINGRIDHNKMATISATVGVRNF
QHLQLIMDSLKNLPDVYVVKRVIH
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagacaaaggaattaacgcacgaagacgtcaaaaacatggttgccaagtacatg
aatgaggagcacgtggccctagtggagcgggcctaccacttcgcagccgttgcccaccag
ggccaggttcgcaagtccggtgaaccctacatcattcatccaatccaagtcgccggaatc
ctggccgaattaaagatggacccggaaacggtgtgtgccggctacatgcatgatttggtg
gaggataccggcgccactttggatgacatcaaggaactgttcgggccgacgattgccatg
atcgtcgacggcgacaccaagatctccaagatccactacaagtccaacaaggaacagatg
gccgaaacccaccggaagttgttgctcgccatgagcaaggacatccgggtgatgatcgtc
aagttggccgaccgcctgcacaacatgcggaccttaaagcacctgcgcccggataagcaa
cggcgcatctccaacgaaacgctggaaatctacgccccgattgccgaccggctggggatt
tcgaccatcaaatgggagctagaagacctgtcgttgcgctacttaaacccgcaacagtac
taccggatcgtccacttgatgaactcccggcgcgaccagcggattgactacatcagcgcc
gctatcaaggtcgtgaaaacggcgatcgccgacctcgacctcggccccaacgttgaaatc
tacgggcgccccaagcacatctactctgtctaccgcaagatggtcacccagcacaagcag
ttctcccagatttacgacctgctggcgatccgggtggtcgtcgattcgattaaggattgt
tacgccgtattaggggcgatccacacttcctggaccccgatgccgggccggtttaaggac
tacatcgccatgccaaaggctaacggctaccaatccctgcacaccaccgtgattgggccc
gagggccggccgctggaaatccagatccggacccaccaaatgcacgaggtcgccgaatac
ggggtcgccgcccactgggcctacaaggagggcaagaccaacggggtcgatcaagccagc
caggattccaagaagctcaacgtggtcaaggaaatcctcgagttgcggagcgagtctaac
ggtaccgacgagttcatgcaggggatccaatccgacgtcttcgccgataaggtttacgcc
tttacgccgaagggcgacgccatcgaaatgccgaagggcgccggaccgttagacatggcc
taccaaattcacaccgaagttgggaaccacaccaccggggccaaggtcaatggtcggatc
ataccgctcaactacgagatcaaaaacggtgacatcgtcgacattttaacctcgtcgtca
tcggctgggccgagccgcgactggatggacctggtctccacccggcgggcccgcaacaag
atccgccagttcttccgcacccacgaccgcgaggaaaacgtgatcgaggggcgccggatc
atggaacaacagctcagggacgccggctacgagccagccgagttaatggtcagcgataag
gaagaagagatcgccggcaagctccactacaagaccgccgacgacatgtacgccgccctg
ggctttggcgacatcgccccgatcggcctgcggaaccggtttaccgaagacatccgtaag
cacaaggaagaagagaagcaaaacgccgcccaaaaggcaattctggaagggcacaagacc
ctagaacaggagccgccgacccgccagaaggtcgctaagtcttccgaaggggtggtcgtc
gaaggggtcgacaacctcttgacccgcctgtcgcactgttgctcaccagtgccgggcgac
gccatcgtcggctacatcaccaagggccgcggggtctcggtgcaccgggccgactgcccc
aacatcaaggcggccgaaaagagcggccagcgggtcgtctccgtttactgggcgaaccca
gccggcgacaagaccaactacaacgccgatattgaagttgagggctacaaccgcaacggc
ctgctcaatgacatcatccgggcgattaacaacaacacccgctacttgacgtcgatcaac
ggtcggatcgaccacaacaagatggccaccatctcggcgaccgtcggggtgcgcaacttc
cagcacctccagttgatcatggattcgttaaagaacctgccggacgtgtacgtggtcaag
cgggtcattcactag
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