Limosilactobacillus fermentum F-6: LBFF_0876
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Entry
LBFF_0876 CDS
T02669
Symbol
aspS
Name
(GenBank) Aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LBFF_0876 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lff01007
]
LBFF_0876 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lff03016
]
LBFF_0876 (aspS)
03029 Mitochondrial biogenesis [BR:
lff03029
]
LBFF_0876 (aspS)
Enzymes [BR:
lff01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LBFF_0876 (aspS)
Amino acid related enzymes [BR:
lff01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LBFF_0876 (aspS)
Transfer RNA biogenesis [BR:
lff03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LBFF_0876 (aspS)
Prokaryotic type
Other AARSs
LBFF_0876 (aspS)
Mitochondrial biogenesis [BR:
lff03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LBFF_0876 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AGL88770
LinkDB
All DBs
Position
923124..924899
Genome browser
AA seq
591 aa
AA seq
DB search
MKRTNYAGRTSEEQIGQEVVVKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEEEDQAAFE
VANQARNQYILEARGLVRARAEVNPDIATGKIEIEVKEAKILAKSQTPPFEVQDDVDASE
DLRLKYRYVDLRRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIV
PSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQPEFTQIDTEMSF
AEPEEIQAMAEGLIKRVMKEAVGVDVPTPFPRMEWQEAMDKYGSDKPDTRFDMLIQDVSD
LVKDSSFKVFSATVADGNFVRAIVVPGGADKYSRKDITKKEDYIKRYGAKGLAWVKVTEE
GYNGPVAKFLNDDANALNERLSAKVGDLVLFVAGSFHVVCDSLGYLRESIAKELDLIDEN
KFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQAHAQSYDIVLNG
NEIGGGSIRIHDPEVQEKVFKALGYTKEAAQARFGFLIKALENGMPPEGGMAFGLDRWVM
LLAHADSIRDVIAFPKNSKAVEPLTAAPGTVDDEQLEVLHLNVEEAPKEAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaaccaattacgctggccgcacgagcgaagaacaaatcggccaagaagttgtt
gttaaggggtgggtggctaagcgccgtaacctcgggggcttgatctttatcgacctgtgg
gaccgggaagggattgtccaactggtctttaacgaagaagaagaccaggcggcctttgaa
gtggctaaccaggcccgtaaccaatacattttagaggcccgcgggctggtccgcgcccgg
gccgaagtcaacccggacattgcgaccgggaagattgaaattgaggttaaggaagctaag
atcctggccaagtcccagaccccgccgtttgaagtccaagacgacgtcgacgcctccgaa
gacctgcgcttgaagtaccgctacgtcgacttgcgccggccaaagatgatgaactacttg
aagttacgttccaaggtaacctcaattgttcacaactactttgataataacgactttttg
gacgtggaaacgccggaactgacccgctcgacgccggaaggggcccgcgattacatcgtg
ccgtcccgggtttacccgggtcacttctacgccctgccacagtcgccgcaactcttcaag
caactcttgatggccgccggggtggacaagtactaccaaatcgctaagtgcttccgcgac
gaagacctgcgtggtgaccgccaaccggaattcacccagatcgacaccgaaatgtccttt
gccgaaccagaagaaattcaagcaatggccgaagggttgatcaagcgggtgatgaaagaa
gccgttggcgtggacgtgccgaccccgttcccgcgcatggaatggcaagaggcgatggat
aagtacggttccgacaagccggatacccgctttgacatgctgattcaagacgtctccgac
ctggttaaggactcctcgtttaaggtcttttcggcaacggtggcggacggcaactttgtc
cgggcgatcgtggtcccggggggcgccgacaagtactcccgcaaggacatcaccaaaaaa
gaagattacatcaagcgttacggcgctaagggcttagcctgggtgaaggtgaccgaagag
ggttacaacggtccggtagccaagttcttaaatgacgacgccaacgcccttaatgaacgt
ttaagtgccaaggtaggggacctggtcctcttcgtggccggctccttccacgtggtctgc
gactccttgggttacctgcgtgaaagcatcgccaaggaactggacttgattgacgaaaac
aagttcaactacctctgggtaattaactggccgatgtttgaatacgacgaaggctttggt
aagtggatcgccgctcaccacccgttcacgatgttaaacgaagacgacctcaagtactta
gaagagggcgaggacccgcaccaggcccacgcccaatcctacgacatcgtcttaaacggg
aacgaaatcggtggtggctcaatccgtatccacgacccagaagtgcaagaaaaggtcttc
aaggccctcggttacaccaaggaagccgcccaggcccgctttggcttcttgattaaggcc
ttagaaaacgggatgccgccagaaggtgggatggcctttgggctcgaccgttgggtaatg
ctgttggcccacgccgactcgatccgcgacgtgatcgccttcccaaagaactccaaggcc
gttgaaccgctgaccgccgccccgggcacggttgacgatgaacaactggaggtcttgcac
ctaaacgttgaagaggcgccaaaggaagccgaataa
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