Limosilactobacillus fermentum F-6: LBFF_0887
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Entry
LBFF_0887 CDS
T02669
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBFF_0887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lff03032
]
LBFF_0887
Enzymes [BR:
lff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
LBFF_0887
DNA replication proteins [BR:
lff03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LBFF_0887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
Toprim_2
Toprim_4
DnaB_bind
Toprim_3
Toprim
Motif
Other DBs
NCBI-ProteinID:
AGL88781
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Position
934242..936137
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AA seq
631 aa
AA seq
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MPQIPRETIDQLRNQVDIADVISQDIQLKKQGKNLMGHCPFHEDATPSFSVNEEKQYFYC
FSCHRSGDVFSYLEQAHDLSFMEAVEQVATTAGVDLPRESNGPSGESASPNTPLYRLHEE
ASRLYHHVLVNTVAGQPALNYLTKRGMSRELIGQFNLGFAPARGEEDLLVKYFTQKGIDY
QLMRASGLFTEDQTGQLHDRFFDRVIYPIKNANGQPIAFSGRLLTKKATENAPKYLNSPE
TPIFNKRRTLFNLDQAKKAARKEGHLTLFEGFMDVISAFGAGVRSGIASMGTSFTDEQVA
VIARTTDKLTICYDGDAAGQNAINRALTMLAASRLTLRVVQLPAGMDPDEYVQANGQAKF
QEYLAHAEETPTAFRLHFLKQGLNLANQSELLHYVEAALREVAKVTDPVERDLYIQQLAK
DYHLNPATLTGQVQELAATAAPRPAYPENSPRQPRQAGTRRYQSTPPTTTTAPSTQAPPL
LGKVELAQQRLLREMFHNPAVRSHVGAIENFHFVDRPYQLLDAAAKEQLQRTGADEVDVA
QLMGELTDAKLRTIVGQIEQRVVPQAAVDETVDDCLAVLVDVAPIEQQIREKTAALQEAA
ALNDQQLITKLTIELIDLRRQEQKMKTEDVN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaatcccaagggaaacgatcgatcagctacgcaaccaagtggacattgccgac
gtcattagccaagacatccagctcaaaaagcaggggaaaaacctgatggggcactgtccc
tttcacgaggatgccaccccgtctttttcggtcaacgaagaaaaacagtatttttattgt
ttctcctgtcaccgcagcggggacgtctttagctacttggagcaggcccacgacctctcc
ttcatggaggccgtcgaacaggtagccacgacggcgggggttgacttgccaagggaaagt
aacggcccgagcggggaaagcgcctctcccaacaccccgctttaccgcttacacgaagag
gccagtcgcctttaccaccacgttttggttaacactgtggcgggacagccggccctcaat
tacctaaccaagcgggggatgagccgggagttaatcggccagtttaacctcggttttgcc
cccgcccggggggaagaggacctcttggtcaagtacttcacccaaaaggggatcgattac
cagctcatgcgggcctcgggcttatttaccgaggaccaaaccgggcagttgcacgaccgt
ttctttgaccgggtgatttacccaatcaaaaacgctaacgggcaaccaatcgccttttcc
gggcgcttattgactaaaaaggcgaccgaaaacgcccctaagtacttaaacagcccggag
acgccgatctttaataaacggcggaccctctttaacctggaccaagccaaaaaggcggcc
agaaaggagggacacctaaccctcttcgaaggcttcatggacgtgatctcggcctttggg
gcgggggtccggtcggggattgcctcgatggggacttcctttaccgacgagcaggtggcc
gtgattgcccgcaccaccgataagctgacgatttgctacgacggggatgccgccgggcaa
aacgccatcaaccgggcgctgacgatgctggcggccagccggttaaccctgcgcgtggtc
cagttaccggccggtatggacccggatgagtacgtccaagctaatggtcaagccaagttt
caagagtacctcgcccacgccgaggagacgccgaccgcctttcggcttcactttttaaag
caggggcttaacctagccaaccaaagtgagctcttgcactacgttgaagccgccttgcgg
gaggttgctaaggtcactgatccggtggaacgggacctctacattcaacagctggcgaag
gattaccacttaaatcccgccactttgaccgggcaggtgcaggaactagcggcgaccgcg
gcgccacgcccggcttacccggagaactcccctcgtcagccgcggcaagcagggacgcgg
cgttatcaatccacgccccccaccacaactaccgcgccgagtacccaggcgccaccgctg
ttggggaaggtcgaattggctcagcaacggctcctgcgggagatgtttcataatcccgcc
gtccgcagccacgtgggggcgattgaaaacttccactttgtcgatcgcccttaccagctc
cttgacgcggccgccaaggagcagttgcaaaggaccggggccgacgaggtggacgtcgcc
cagttaatgggggagctgaccgacgctaagctcaggacgatcgttggccagatcgagcaa
cgggtggtgccacaagcggcggtggatgagaccgtcgacgattgccttgccgtgctcgtc
gacgtcgccccgattgaacaacaaataagagagaaaacggccgcccttcaggaggctgcc
gccttaaacgatcaacaattgatcaccaagcttacgatcgagttgattgacttgcggcga
caggaacagaagatgaaaacggaggatgttaattaa
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