Limosilactobacillus fermentum F-6: LBFF_0931
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Entry
LBFF_0931 CDS
T02669
Name
(GenBank) Integration host factor, alpha subunit
KO
K03530
DNA-binding protein HU-beta
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lff03032
]
LBFF_0931
03036 Chromosome and associated proteins [BR:
lff03036
]
LBFF_0931
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_0931
DNA replication proteins [BR:
lff03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LBFF_0931
Chromosome and associated proteins [BR:
lff03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LBFF_0931
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LBFF_0931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AGL88825
LinkDB
All DBs
Position
978600..978875
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELVTNVATATGLTKKDATAAVDAVFSSIQASLAKGEKVQLIGFGNFEVRERAARK
GRNPQTGQEIQIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaggcagaattagttaccaacgttgcaactgcaaccggtctgactaagaag
gatgcaaccgcagctgttgacgcagttttcagctccatccaagcttccttggctaagggt
gaaaaggttcaactgatcggctttggtaacttcgaagttcgtgaacgtgctgcccgcaag
ggtcgtaacccacaaactggtcaagaaatccaaattcctgcaagcaaggttccggcattc
aagccaggaaaggcgcttaaggacgccgttaagtaa
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