KEGG   Limosilactobacillus fermentum F-6: LBFF_1350
Entry
LBFF_1350         CDS       T02669                                 
Symbol
rnc
Name
(GenBank) Ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lff  Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:lff00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LBFF_1350 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lff03019]
    LBFF_1350 (rnc)
   03009 Ribosome biogenesis [BR:lff03009]
    LBFF_1350 (rnc)
   03036 Chromosome and associated proteins [BR:lff03036]
    LBFF_1350 (rnc)
Enzymes [BR:lff01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LBFF_1350 (rnc)
Messenger RNA biogenesis [BR:lff03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LBFF_1350 (rnc)
Ribosome biogenesis [BR:lff03009]
 Eukaryotic type
  90S particles
   RNase
    LBFF_1350 (rnc)
 Prokaryotic type
  rRNA processing factors
   LBFF_1350 (rnc)
Chromosome and associated proteins [BR:lff03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LBFF_1350 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase Tombus_movement
Other DBs
NCBI-ProteinID: AGL89243
LinkDB
Position
complement(1379974..1380672)
AA seq 232 aa
MITQLQDYLAKTYGIHFNNPALLAEAFTQASYVNEHPHENLKYYERIEFLGDAVLQLFVS
EYIYRRYPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGKGEEMAGARNRASLLC
DIFESFIGALYLDQGRQAVEQFIQTVIFPKLDLGWFDHAVDAKTSLQEFLQRNGDVAIEY
DLLSEGGTENDPVFEVEVTVDGKKVATGQGSSKKHAEMEAAKHALEKLRMDK
NT seq 699 nt   +upstreamnt  +downstreamnt
atgattacacaattgcaggattacctagccaaaacctacgggattcactttaataacccg
gcgctgttggccgaagcctttacccaggcctcatacgtcaacgagcacccgcacgagaac
ctaaagtactacgaacgaattgaatttttgggggacgcggtgttacagctcttcgtctcc
gaatacatctaccgccgctatccggaactgccccaggggaaattaacccggctgcgggcc
gccatggtttgcgaggactccttttctaagtttgccaaggagtgccactttgaccagtac
atccgcctgggtaagggggaggaaatggccggggcgcgcaaccgggctagccttctgtgc
gatattttcgaatcctttattggggccctgtacctagaccagggacgccaagcggtcgaa
cagtttattcaaaccgttatcttccctaagcttgacctggggtggttcgatcacgccgtc
gatgccaagaccagcctgcaggaattcctgcaaagaaacggtgacgtggcaatcgaatac
gacctcctaagcgaagggggaacggaaaacgacccggtctttgaagtggaagtaaccgtt
gacggtaaaaaggttgccaccggccagggaagttccaagaagcacgcggaaatggaagcc
gctaaacacgccttagaaaaactacgaatggacaagtag

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