Limosilactobacillus fermentum F-6: LBFF_1350
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Entry
LBFF_1350 CDS
T02669
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LBFF_1350 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lff03019
]
LBFF_1350 (rnc)
03009 Ribosome biogenesis [BR:
lff03009
]
LBFF_1350 (rnc)
03036 Chromosome and associated proteins [BR:
lff03036
]
LBFF_1350 (rnc)
Enzymes [BR:
lff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LBFF_1350 (rnc)
Messenger RNA biogenesis [BR:
lff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBFF_1350 (rnc)
Ribosome biogenesis [BR:
lff03009
]
Eukaryotic type
90S particles
RNase
LBFF_1350 (rnc)
Prokaryotic type
rRNA processing factors
LBFF_1350 (rnc)
Chromosome and associated proteins [BR:
lff03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LBFF_1350 (rnc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Tombus_movement
Motif
Other DBs
NCBI-ProteinID:
AGL89243
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All DBs
Position
complement(1379974..1380672)
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AA seq
232 aa
AA seq
DB search
MITQLQDYLAKTYGIHFNNPALLAEAFTQASYVNEHPHENLKYYERIEFLGDAVLQLFVS
EYIYRRYPELPQGKLTRLRAAMVCEDSFSKFAKECHFDQYIRLGKGEEMAGARNRASLLC
DIFESFIGALYLDQGRQAVEQFIQTVIFPKLDLGWFDHAVDAKTSLQEFLQRNGDVAIEY
DLLSEGGTENDPVFEVEVTVDGKKVATGQGSSKKHAEMEAAKHALEKLRMDK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgattacacaattgcaggattacctagccaaaacctacgggattcactttaataacccg
gcgctgttggccgaagcctttacccaggcctcatacgtcaacgagcacccgcacgagaac
ctaaagtactacgaacgaattgaatttttgggggacgcggtgttacagctcttcgtctcc
gaatacatctaccgccgctatccggaactgccccaggggaaattaacccggctgcgggcc
gccatggtttgcgaggactccttttctaagtttgccaaggagtgccactttgaccagtac
atccgcctgggtaagggggaggaaatggccggggcgcgcaaccgggctagccttctgtgc
gatattttcgaatcctttattggggccctgtacctagaccagggacgccaagcggtcgaa
cagtttattcaaaccgttatcttccctaagcttgacctggggtggttcgatcacgccgtc
gatgccaagaccagcctgcaggaattcctgcaaagaaacggtgacgtggcaatcgaatac
gacctcctaagcgaagggggaacggaaaacgacccggtctttgaagtggaagtaaccgtt
gacggtaaaaaggttgccaccggccagggaagttccaagaagcacgcggaaatggaagcc
gctaaacacgccttagaaaaactacgaatggacaagtag
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