Limosilactobacillus fermentum F-6: LBFF_1366
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Entry
LBFF_1366 CDS
T02669
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBFF_1366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lff03021
]
LBFF_1366
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_1366
Enzymes [BR:
lff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBFF_1366
Transcription machinery [BR:
lff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBFF_1366
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBFF_1366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF4880
Dbr1_C
Motif
Other DBs
NCBI-ProteinID:
AGL89259
LinkDB
All DBs
Position
complement(1397783..1398067)
Genome browser
AA seq
94 aa
AA seq
DB search
MILFPSVDKLLERVDSRYSLIMLASKRAHEIDKYRIDKWRAAHPDKAGETVSLEGDKPLL
LDHYDSNKSVGMALEEIEAGLVTIDPDQHEDLQD
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatcttatttccatccgttgataagctattagagcgggttgactcccgttactcacta
atcatgttggctagcaagcgggcccacgaaatcgacaagtaccggatcgataagtggcgg
gcggcccacccggataaggctggcgaaacggtcagcttagaaggcgacaagccgctcttg
ttggaccactatgactccaacaagtccgttgggatggcgctggaagaaatcgaagcggga
ttggtaacgatcgaccccgaccaacacgaagacttacaagattaa
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